RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 HIST1H2BCP62807 126 aa15.42■□□□□ 0.06
MBD3-201ENST00000156825 JOSD1Q15040 202 aaPredicted RBP15.42■□□□□ 0.06
MBD3-201ENST00000156825 HIST2H2BEQ16778 126 aa15.42■□□□□ 0.06
MBD3-201ENST00000156825 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.42■□□□□ 0.06
MBD3-201ENST00000156825 SLC25A48Q6ZT89 311 aaKnown RBP15.42■□□□□ 0.06
MBD3-201ENST00000156825 MBD3L1Q8WWY6 194 aa15.42■□□□□ 0.06
MBD3-201ENST00000156825 HIST1H2BHQ93079 126 aa15.42■□□□□ 0.06
MBD3-201ENST00000156825 HIST1H2BNQ99877 126 aa15.42■□□□□ 0.06
MBD3-201ENST00000156825 HIST1H2BMQ99879 126 aa15.42■□□□□ 0.06
MBD3-201ENST00000156825 TRAV8-1A0A0A6YYK1 113 aa15.41■□□□□ 0.06
MBD3-201ENST00000156825 CYB5R2Q6BCY4 276 aa15.41■□□□□ 0.06
MBD3-201ENST00000156825 Q8TAT8 98 aa15.41■□□□□ 0.06
MBD3-201ENST00000156825 STAG3L3P0CL85 134 aa15.41■□□□□ 0.06
MBD3-201ENST00000156825 Q6AWC8 147 aa15.41■□□□□ 0.06
MBD3-201ENST00000156825 AGMATQ9BSE5 352 aa15.41■□□□□ 0.06
MBD3-201ENST00000156825 PRDM13Q9H4Q3 707 aa15.41■□□□□ 0.06
MBD3-201ENST00000156825 SIGLEC15Q6ZMC9 328 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 OSTCQ9NRP0 149 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 MRPL16Q9NX20 251 aaKnown RBP15.4■□□□□ 0.06
MBD3-201ENST00000156825 TTC9CQ8N5M4 171 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 SLC25A39Q9BZJ4 359 aaPredicted RBP15.4■□□□□ 0.06
MBD3-201ENST00000156825 MYO18BQ8IUG5 2567 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 CXCL1P09341 107 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 SCGB1A1P11684 91 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 ZNF257Q9Y2Q1 563 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 A0A0U1RRA0 63 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 NCR2O95944 276 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 RIPPLY3P57055 190 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 NUDT10Q8NFP7 164 aa15.4■□□□□ 0.06
MBD3-201ENST00000156825 TRAV21A0A0B4J279 112 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 C5orf64Q2M2E5 130 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 BUB1B-PAK6H3BSN5 160 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 PAX1P15863 534 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 GSN-AS1Q9NRJ2 163 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 TMEM170AQ8WVE7 144 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 SOX21Q9Y651 276 aaPredicted RBP15.39■□□□□ 0.05
MBD3-201ENST00000156825 TMEM14EPQ6UXP3 125 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 PROK2Q9HC23 129 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 IGHV3-73A0A0B4J1V6 119 aa15.39■□□□□ 0.05
MBD3-201ENST00000156825 PTPN13Q12923 2485 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 A0A1B0GWJ7 208 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 SMIM13P0DJ93 91 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 FXYD7P58549 80 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 SRSF7Q16629 238 aaKnown RBP eCLIP15.38■□□□□ 0.05
MBD3-201ENST00000156825 FAM90A9PA6NNJ1 464 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 TYMSP04818 313 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 SIGLEC9Q9Y336 463 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 B4DSR2 109 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 DUX4L9Q6RFH8 374 aaPredicted RBP15.38■□□□□ 0.05
MBD3-201ENST00000156825 GBF1Q92538 1859 aa15.38■□□□□ 0.05
MBD3-201ENST00000156825 IGKV1-6A0A0C4DH72 117 aa15.37■□□□□ 0.05
MBD3-201ENST00000156825 CD5P06127 495 aa15.37■□□□□ 0.05
MBD3-201ENST00000156825 C2orf88Q9BSF0 95 aa15.37■□□□□ 0.05
MBD3-201ENST00000156825 ST20Q9HBF5 79 aa15.37■□□□□ 0.05
MBD3-201ENST00000156825 TDGF1P13385 188 aa15.37■□□□□ 0.05
MBD3-201ENST00000156825 DNAL4O96015 105 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 LINC00614P0C842 121 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 ZNF503-AS2A6NEH8 195 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 SAP30O75446 220 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 HELZP42694 1942 aaKnown RBP15.36■□□□□ 0.05
MBD3-201ENST00000156825 IGHV3-64A0A075B6Q5 118 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 SAA4P35542 130 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 C15orf62A8K5M9 175 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 FOXL1Q12952 345 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 VCX2Q9H322 139 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 MSRB2Q9Y3D2 182 aa15.36■□□□□ 0.05
MBD3-201ENST00000156825 SIP14410 1827 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 CACNG7P62955 275 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 TRGV4A0A0C4DH28 118 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 A0A1B0GW15 77 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 RUSC1-AS1Q66K80 236 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 FOXL2NBQ6ZUU3 175 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 GLRX5Q86SX6 157 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 FCN3O75636 299 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 TSKUQ8WUA8 353 aa15.35■□□□□ 0.05
MBD3-201ENST00000156825 SRRM4A7MD48 611 aaKnown RBP15.34■□□□□ 0.05
MBD3-201ENST00000156825 LINC01551Q86U37 167 aa15.34■□□□□ 0.05
MBD3-201ENST00000156825 LINC00479Q96M42 142 aa15.34■□□□□ 0.05
MBD3-201ENST00000156825 DMRTC2Q8IXT2 367 aaPredicted RBP15.34■□□□□ 0.05
MBD3-201ENST00000156825 MED13Q9UHV7 2174 aa15.34■□□□□ 0.05
MBD3-201ENST00000156825 TRAV9-1A0A075B6T8 112 aa15.34■□□□□ 0.05
MBD3-201ENST00000156825 NIT1Q86X76 327 aa15.34■□□□□ 0.05
MBD3-201ENST00000156825 DYSFO75923 2080 aa15.34■□□□□ 0.05
MBD3-201ENST00000156825 TICRRQ7Z2Z1 1910 aa15.33■□□□□ 0.05
MBD3-201ENST00000156825 LOC105371267A0A1B0GV96 52 aa15.33■□□□□ 0.05
MBD3-201ENST00000156825 Q6ZR03 302 aa15.33■□□□□ 0.05
MBD3-201ENST00000156825 LINC00587B1AMM8 73 aa15.33■□□□□ 0.04
MBD3-201ENST00000156825 K7ENP7 123 aa15.33■□□□□ 0.04
MBD3-201ENST00000156825 DUSP14O95147 198 aaKnown RBP15.33■□□□□ 0.04
MBD3-201ENST00000156825 TCRAP04437 139 aa15.33■□□□□ 0.04
MBD3-201ENST00000156825 TRAV12-3A0A0B4J271 114 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 CNTFRP26992 372 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 IFI27P40305 119 aaPredicted RBP15.32■□□□□ 0.04
MBD3-201ENST00000156825 HBDP02042 147 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 PLXNA3P51805 1871 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 RNF223E7ERA6 249 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 MINOS1Q5TGZ0 78 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 MINOS1-NBL1R4GNA1 71 aa15.32■□□□□ 0.04
MBD3-201ENST00000156825 TRBV6-6A0A0A6YYG2 114 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms