RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TBL2Q9Y4P3 447 aaKnown RBP9.78□□□□□ -0.84
CHPF2-201ENST00000035307 PTPRBP23467 1997 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 TRAV40A0A0B4J280 105 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 IGHV2-70P01814 119 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 AMBPP02760 352 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 HIST3H2BBQ8N257 126 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 NUP37Q8NFH4 326 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 SRRM4A7MD48 611 aaKnown RBP9.78□□□□□ -0.84
CHPF2-201ENST00000035307 TWIST1Q15672 202 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 CDPF1Q6NVV7 123 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 KLK15Q9H2R5 256 aa9.78□□□□□ -0.84
CHPF2-201ENST00000035307 S100A7P31151 101 aa9.77□□□□□ -0.84
CHPF2-201ENST00000035307 C10orf91Q5T1B1 145 aa9.77□□□□□ -0.84
CHPF2-201ENST00000035307 SP5Q6BEB4 398 aaPredicted RBP9.77□□□□□ -0.84
CHPF2-201ENST00000035307 Q71RC1 249 aaPredicted RBP9.77□□□□□ -0.84
CHPF2-201ENST00000035307 LOXL3P58215 753 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 GUSBP1Q15486 140 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 KRTAP27-1Q3LI81 207 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 SPATA45Q537H7 98 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 CCDC144NLQ6NUI1 221 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 KCNS1Q96KK3 526 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 SCRT1Q9BWW7 348 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 NPIPB11E5RHQ5 1161 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 M0QZ24 198 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 IGHV1-8P0DP01 117 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 MFAP4P55083 255 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 MEF2CQ06413 473 aaPredicted RBP9.77□□□□□ -0.85
CHPF2-201ENST00000035307 TXNDC17Q9BRA2 123 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 Q9H3A6 140 aa9.77□□□□□ -0.85
CHPF2-201ENST00000035307 HCFC1P51610 2035 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 IGHV2-26A0A0B4J1V2 119 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 HLA-DQA1P01909 254 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 PDLIM4P50479 330 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.76□□□□□ -0.85
CHPF2-201ENST00000035307 PIMREGQ9BSJ6 248 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 MCRIP2Q9BUT9 160 aaKnown RBP9.76□□□□□ -0.85
CHPF2-201ENST00000035307 DMRT1Q9Y5R6 373 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 TEP1Q99973 2627 aaKnown RBP9.76□□□□□ -0.85
CHPF2-201ENST00000035307 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.76□□□□□ -0.85
CHPF2-201ENST00000035307 GGCTO75223 188 aaKnown RBP9.76□□□□□ -0.85
CHPF2-201ENST00000035307 MGPP08493 103 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 RUSC1-AS1Q66K80 236 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 C18orf15Q96N68 181 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 H0YJW9 148 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 C15orf65H3BRN8 121 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 LMO1P25800 156 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 PTTG1IPP53801 180 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 C17orf58Q2M2W7 97 aa9.76□□□□□ -0.85
CHPF2-201ENST00000035307 TMEM189A5PLL7 270 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 M0R3E3 92 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 FAM106CPP0CH98 169 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 RIGQ13278 110 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 WFDC12Q8WWY7 111 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 FBXL7Q9UJT9 491 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 TRAV1-1A0A0B4J248 108 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 PMS2P5A8MQ11 134 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 RELQ04864 619 aaPredicted RBP9.75□□□□□ -0.85
CHPF2-201ENST00000035307 GPX4P36969 197 aaPredicted RBP9.75□□□□□ -0.85
CHPF2-201ENST00000035307 FXYD7P58549 80 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 CLEC19AQ6UXS0 136 aa9.75□□□□□ -0.85
CHPF2-201ENST00000035307 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
CHPF2-201ENST00000035307 HAX1O00165 279 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 PSG1P11464 419 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 LOXP28300 417 aaPredicted RBP9.74□□□□□ -0.85
CHPF2-201ENST00000035307 SPANXN1Q5VSR9 72 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 CIARTQ8N365 385 aaPredicted RBP9.74□□□□□ -0.85
CHPF2-201ENST00000035307 NEU4Q8WWR8 484 aaPredicted RBP9.74□□□□□ -0.85
CHPF2-201ENST00000035307 C22orf46C9J442 243 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 CORTO00230 105 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 LEPROTL1O95214 131 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 RPL15P61313 204 aaKnown RBP9.74□□□□□ -0.85
CHPF2-201ENST00000035307 PRSS8Q16651 343 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 ZNF841Q6ZN19 808 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 TMEM170AQ8WVE7 144 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 C5orf30Q96GV9 206 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 C16orf92Q96LL3 132 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 TRBV24-1A0A075B6N3 115 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 NMUP48645 174 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 SLC25A48Q6ZT89 311 aaKnown RBP9.74□□□□□ -0.85
CHPF2-201ENST00000035307 GLMPQ8WWB7 406 aa9.74□□□□□ -0.85
CHPF2-201ENST00000035307 A0A1W2PPI3 338 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 RNF223E7ERA6 249 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 GCGP01275 180 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 RNASE2P10153 161 aaKnown RBP9.73□□□□□ -0.85
CHPF2-201ENST00000035307 CKS2P33552 79 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 ZNF138P52744 262 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 LCN12Q6JVE5 192 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 C21orf62Q9NYP8 219 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 TCRBV4S1A1TA0A5B7 111 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 SIAH2O43255 324 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 MT-ND6P03923 174 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 SRD5A1P18405 259 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 EFNA4P52798 201 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 TEX45Q8NA69 505 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 MRPL32Q9BYC8 188 aaKnown RBP9.73□□□□□ -0.85
CHPF2-201ENST00000035307 RNF24Q9Y225 148 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 A6NNC1 897 aa9.73□□□□□ -0.85
CHPF2-201ENST00000035307 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
CHPF2-201ENST00000035307 VMO1Q7Z5L0 202 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms