RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Tmem184aQ3UFJ6 425 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Lrrc52Q5M8M9 314 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Q8BTC1 67 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Mrpl13Q9D1P0 178 aaKnown RBP11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Samt1A2BED8 237 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Gm15140A2BEE3 237 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Ankrd66J3QNN4 192 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Cnih1O35372 144 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 P01803 113 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Dnase2P56542 353 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 RhodP97348 210 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Taar3Q5QD16 343 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 AdoQ6PDY2 256 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 RetnlgQ8K426 117 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 RtbdnQ8QZY4 247 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Nup35Q8R4R6 325 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Prss37Q9DAA4 237 aa11.24□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Pkd1l2Q7TN88 2461 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Iglv3A0A0B4J1K5 122 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr282A1L1B4 308 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Wipf3P0C7L0 485 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Pet117P0DJF2 80 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Tmem171Q4KL18 322 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Kcnip4Q6PHZ8 250 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Prickle3Q80VL3 624 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Zfp729bQ80VN4 1045 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Crispld2Q8BZQ2 495 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 RfxapQ8VCG9 231 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr480Q8VEZ0 312 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr1454Q8VFW2 307 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr508Q8VG42 310 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Ykt6Q9CQW1 198 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Scgb1b12A0A087WP21 93 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Trbv15A0A0A6YYE3 115 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr39E9PVX1 319 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Fgf4P11403 202 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Foxa2P35583 459 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Patz1Q5NBY9 687 aaKnown RBP11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr1026Q7TR90 307 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 BC049730Q810N3 246 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Ccdc198Q9CPZ1 294 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 9130008F23RikQ9D2Z6 181 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Prr30Q9D9B7 401 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Cst10Q9JM84 148 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Col24a1Q30D77 1733 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 F5O88783 2183 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Tpt1P63028 172 aaKnown RBP11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Zfp936Q3ULA8 456 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 TskuQ8CBR6 354 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Commd9Q8K2Q0 198 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 IdnkQ8R0J8 184 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Ptrh2Q8R2Y8 181 aaKnown RBP11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Trappc2lQ9JME7 139 aa11.23□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Gm42420A0A0J9YUQ2 99 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr1328B1ARV2 313 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Wdr86D3Z757 380 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Gm14408E9Q6B9 136 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Dvl1P51141 695 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Gpank1Q61858 372 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Rnd1Q8BLR7 232 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr507Q8VG13 316 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Sval2Q99N75 144 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 LitafQ9JLJ0 161 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Suclg1Q9WUM5 346 aaKnown RBP11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Gm5108J3QP01 101 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 GzmfP08883 248 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 SpartQ8R1X6 671 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr530Q8VFE8 307 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Mecp2Q9Z2D6 484 aaKnown RBP11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Notch3Q61982 2318 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Ranbp2Q9ERU9 3053 aaKnown RBP11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Ighv5-2A0A0A6YVX8 117 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Vmn1r113G3UWI8 307 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 P01680 129 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Ifna5P07349 189 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Spam1P48794 512 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Hhipl1Q14DK5 791 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Apobec4Q497M3 374 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Wipi1Q8R3E3 446 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Olfr1259Q8VEZ1 309 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Tmem107Q9CPV0 140 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Uqcc1Q9CWU6 295 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 4931428L18RikQ9D4S9 127 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Hsd17b6Q9R092 317 aa11.22□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 SetxA2AKX3 2646 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Rhox7aA2A4F1 281 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Gm5239D3YYZ2 122 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Cd46O88174 365 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Fut9O88819 359 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 LtbP41155 306 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Rpl29P47915 160 aaKnown RBP11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Exosc2Q8VBV3 293 aaKnown RBP11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Sgms2Q9D4B1 365 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Vmn1r50Q9EP51 310 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Fxyd1Q9Z239 92 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Scgb1b10A0A087WPW0 93 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Pwwp2bE9Q9M8 600 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Vmn1r194J3JS27 296 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Gm6594J3QM43 95 aa11.21□□□□□ -0.61
Pdgfra-205ENSMUST00000201711 Tctn2Q2MV57 700 aa11.21□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms