RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Meox1P32442 253 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 VhlP40338 181 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Hs3st6Q5GFD5 342 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr1368Q8VFG3 314 aa11.29□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Igkv4-50A0A0B4J1J0 117 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Fcrl6A1YIY0 268 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Mgst2A2RST1 147 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm8677K9J7G9 307 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 P04946 108 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Dvl1P51141 695 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rpl19P84099 196 aaKnown RBP11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Slc25a35Q5SWT3 300 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tmem30bQ8BHG3 353 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ss18l1Q8BW22 402 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tsen54Q8C2A2 525 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Vmn1r178Q8R2B6 304 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr827Q8VEV5 322 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Slc50a1Q9CXK4 221 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr465-ps1A0A0U1RPZ4 315 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gsx2P31316 305 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rpl29P47915 160 aaKnown RBP11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rab5bP61021 215 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Rps10P63325 165 aaKnown RBP11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Crebl2Q32M00 123 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr1362Q5SZZ8 308 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Btf3Q64152 204 aaKnown RBP11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Chst4Q9R1I1 388 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Slc25a15Q9WVD5 301 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 FancmQ8BGE5 2021 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 A0A286YDM5 308 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm14124A2AU83 715 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Vmn1r113G3UWI8 307 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ascl5M0QWB7 188 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Mmp9P41245 730 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 4930474N05RikQ8BVR5 218 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tmem230Q8CIB6 120 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Pcgf1Q8R023 259 aaKnown RBP11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr1259Q8VEZ1 309 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr344Q8VFP9 309 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ndufa6Q9CQZ5 131 aaKnown RBP11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ociad1Q9CRD0 247 aaKnown RBP11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Aurkaip1Q9DCJ7 200 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 TollipQ9QZ06 274 aa11.28□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Unc80Q8BLN6 3261 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 TracA0A075B662 137 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Trbv5A0A0B4J1G9 113 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Tmem116A0A0G2JGD3 401 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Ankrd60A2AMD2 318 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Gm12887B1AVM1 119 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr874Q7TRE6 310 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Paqr7Q80ZE4 345 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr1350Q8VF34 308 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 IcaQ9DBD0 700 aa11.27□□□□□ -0.6
Clcn3-204ENSMUST00000110301 Olfr282A1L1B4 308 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm6034E9Q101 117 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr204E9Q8M0 305 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm19684G3UZ45 117 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Sap30lQ5SQF8 182 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr355Q8VFP6 310 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Lamtor1Q9CQ22 161 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Dido1Q8C9B9 2256 aaKnown RBP11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Flg2Q2VIS4 2362 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ighv14-3A0A075B5R9 117 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm5890A0A140LI04 305 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Igkv14-111A0A140T8P9 117 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm15130F6PYN5 206 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Slc35e3Q6PGC7 313 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Olfr654Q8VF27 341 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Pear1Q8VIK5 1034 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ndufa2Q9CQ75 99 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Q9DAZ5 108 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Cyb5r3Q9DCN2 301 aaKnown RBP11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm12728V9GX31 77 aa11.27□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Lrrk2Q5S006 2527 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Igkv13-84A0A140T8N3 115 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm2381G3UY53 305 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Mef2bO55087 349 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Arf6P62331 175 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Cd52Q64389 74 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ifna13Q80SU4 189 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Vmn1r235Q8R297 328 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tmprss11dQ8VHK8 417 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tmem219Q9D123 240 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Mrpl30Q9D7N6 160 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tlnrd1Q9ERE8 362 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Hils1Q9QYL0 170 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Btbd35f23A0A0R4J2B9 498 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 MsmpB1AWI6 139 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Fut1O09160 376 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Rab33bO35963 229 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Wnt2bO70283 389 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Folr2Q05685 251 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tex36Q9D5N9 219 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Wdr31Q9JHB4 367 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 BlnkQ9QUN3 457 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Igkv12-89A0A0G2JGW8 112 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 NgfP01139 241 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Stfa1P35175 97 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Rab5cP35278 216 aa11.26□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm10645Q3UPY1 145 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms