RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 FAM169BQ8N8A8 192 aa7.34□□□□□ -1.23
CHRNA7-219ENST00000636709 RPL36ALQ969Q0 106 aaKnown RBP7.34□□□□□ -1.23
CHRNA7-219ENST00000636709 DKK4Q9UBT3 224 aa7.34□□□□□ -1.23
CHRNA7-219ENST00000636709 ZNF561-AS1K7EIQ3 104 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 ERVH48-1M5A8F1 160 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 IGHV1-8P0DP01 117 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 SSBP2P81877 361 aaPredicted RBP7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 COL4A1P02462 1669 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 TRBV5-7A0A0A0MS05 114 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 OR2K2Q8NGT1 345 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 NEUROG3Q9Y4Z2 214 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 FOXG1P55316 489 aaPredicted RBP7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 PVRIGQ6DKI7 326 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 LYPD2Q6UXB3 125 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 FAM90A1Q86YD7 464 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 EXOC3-AS1Q8N2X6 119 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 CIARTQ8N365 385 aaPredicted RBP7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 CHTOPQ9Y3Y2 248 aaKnown RBP7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 A0A087WWL8 130 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 DEFB131AP59861 70 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 C2orf68Q2NKX9 166 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 TRAV5A0A0B4J249 113 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 IGLV2-23P01705 113 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 PRCDQ00LT1 54 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 LCN12Q6JVE5 192 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 BMPERQ8N8U9 685 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 PRDM13Q9H4Q3 707 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 WDR90Q96KV7 1748 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 A6NNC1 897 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 C15orf61A6NNL5 157 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 GGTLC3B5MD39 225 aa7.33□□□□□ -1.24
CHRNA7-219ENST00000636709 OVOL1O14753 267 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 NAPSAO96009 420 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 C1orf100Q5SVJ3 147 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 PAQR4Q8N4S7 273 aaPredicted RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 PEF1Q9UBV8 284 aaKnown RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 PMS2P5A8MQ11 134 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 TOMM40O96008 361 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 IGLV3-21P80748 117 aaPredicted RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 SRSF1Q07955 248 aaKnown RBP eCLIP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 WBP1Q96G27 269 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 CITED2Q99967 270 aaPredicted RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 C1QTNF4Q9BXJ3 329 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 NYNRINQ9P2P1 1898 aaKnown RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 FREM3P0C091 2139 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 F8VVB4 439 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 F8VWA3 439 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 YPEL1O60688 119 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 CCL1P22362 96 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 CD300EQ496F6 205 aaPredicted RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 ZNF497Q6ZNH5 498 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 DTX1Q86Y01 620 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 YPEL2Q96QA6 119 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 KNCNA6PVL3 124 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 C22orf46C9J442 243 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 PIN1P1O15428 100 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 ZNF250P15622 560 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 NR2C2APQ86WQ0 139 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 SLC25A38Q96DW6 304 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 RPUSD1Q9UJJ7 312 aaKnown RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 CYSLTR1Q9Y271 337 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 LSM4Q9Y4Z0 139 aaKnown RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 IRF3Q14653 427 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 SS18Q15532 418 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 ZNF48Q96MX3 618 aaPredicted RBP7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 SCRT1Q9BWW7 348 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 NRXN2Q9P2S2 1712 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 MST1P26927 711 aa7.32□□□□□ -1.24
CHRNA7-219ENST00000636709 MPTX1A8MV57 137 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 LINC01619G3V211 115 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 HOXD3P31249 432 aaPredicted RBP7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 UQCR10Q9UDW1 63 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 MRPS18CQ9Y3D5 142 aaKnown RBP7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 PLXND1Q9Y4D7 1925 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 TRBV7-1A0A0A6YYK4 115 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 A0A1B0GWB2 263 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 K7ENP7 123 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 GHRHP01286 108 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 TMEM144Q7Z5S9 345 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 PARD6GQ9BYG4 376 aaPredicted RBP7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 PSG8Q9UQ74 426 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 PAX9P55771 341 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 THAP8Q8NA92 274 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 ANAPC10Q9UM13 185 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 KMT2EQ8IZD2 1858 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 NTN3O00634 580 aaPredicted RBP7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 HIST1H4AP62805 103 aaKnown RBP7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 Q8TAT8 98 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 Q9HAA7 133 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 NCR2O95944 276 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 IGLV3-19P01714 112 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 APOC4P55056 127 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 TMEM14DPA8MWL7 114 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 EIF4EBP2Q13542 120 aaPredicted RBP7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 LINC01590Q5TEZ4 76 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 LYZL4Q96KX0 146 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 TMEM126AQ9H061 195 aa7.31□□□□□ -1.24
CHRNA7-219ENST00000636709 MRPS18AQ9NVS2 196 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms