RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PRORYQ9H606 182 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 H7C2G1 150 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 VENTXO95231 258 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 ERCC8Q13216 396 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 FBLN7Q53RD9 439 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 RUSC1-AS1Q66K80 236 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 F11RQ9Y624 299 aaKnown RBP9.08□□□□□ -0.96
VPS8-227ENST00000625842 Q6ZWC4 215 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 AICDAQ9GZX7 198 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 ALPK2Q86TB3 2170 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 USF3Q68DE3 2245 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 BDP1A6H8Y1 2624 aa9.08□□□□□ -0.96
VPS8-227ENST00000625842 H3BQ15 152 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 FCN3O75636 299 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 RUNX1Q01196 453 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 TCTEX1D4Q5JR98 221 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 TMEM256Q8N2U0 113 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 STPG2Q8N412 459 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 NEUROG1Q92886 237 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 TRGV9Q99603 122 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 FBLN5Q9UBX5 448 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 SDK2Q58EX2 2172 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 MLNRO43193 412 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 SRSF1Q07955 248 aaKnown RBP eCLIP9.07□□□□□ -0.96
VPS8-227ENST00000625842 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 LBHQ53QV2 105 aaPredicted RBP9.07□□□□□ -0.96
VPS8-227ENST00000625842 RPP21Q9H633 154 aaKnown RBP9.07□□□□□ -0.96
VPS8-227ENST00000625842 PLXNA1Q9UIW2 1896 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 NUP214P35658 2090 aaPredicted RBP9.07□□□□□ -0.96
VPS8-227ENST00000625842 TSPAN13O95857 204 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 LYPD1Q8N2G4 141 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 NIT2Q9NQR4 276 aa9.07□□□□□ -0.96
VPS8-227ENST00000625842 NDUFA4O00483 81 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 GP9P14770 177 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 PLNP26678 52 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 NKAPP1Q8N9T2 125 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 LOC102724200A0A096LPH7 203 aaPredicted RBP9.06□□□□□ -0.96
VPS8-227ENST00000625842 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 PFN1P07737 140 aaKnown RBP9.06□□□□□ -0.96
VPS8-227ENST00000625842 SPART-AS1P0CW21 52 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 ZNF880Q6PDB4 577 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 ARL17AQ8IVW1 177 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 VPS25Q9BRG1 176 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 PATJQ8NI35 1801 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
VPS8-227ENST00000625842 LINC00158P58513 81 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 MYO16Q9Y6X6 1858 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 HEATR5BQ9P2D3 2071 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 A0A1W2PRE2 83 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 GGTLC3B5MD39 225 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 LY6HO94772 140 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 HGFACQ04756 655 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 C1orf194Q5T5A4 169 aa9.06□□□□□ -0.96
VPS8-227ENST00000625842 CENPWQ5EE01 88 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 TRGC2P03986 189 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 FOLR2P14207 255 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 FOXE3Q13461 319 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 ST6GAL2Q96JF0 529 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 RARRES2Q99969 163 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 CADP27708 2225 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 TRAV34A0A0B4J273 112 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 GRIFINA4D1Z8 144 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 DIRC3C9JPN6 131 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
VPS8-227ENST00000625842 FAM24BQ8N5W8 94 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 SPXQ9BT56 116 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 TRBV25-1A0A075B6N4 114 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 IGKV1D-43A0A0B4J1Z2 117 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 H0YJW9 148 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 IGFL2Q6UWQ7 119 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 TTC9CQ8N5M4 171 aa9.05□□□□□ -0.96
VPS8-227ENST00000625842 IGHV2-5P01817 119 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 B3GALT5-AS1P59052 145 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 ZNF414Q96IQ9 312 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
VPS8-227ENST00000625842 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
VPS8-227ENST00000625842 XCL2Q9UBD3 114 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 TCF20Q9UGU0 1960 aaKnown RBP9.04□□□□□ -0.96
VPS8-227ENST00000625842 C1QCP02747 245 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 PRB3Q04118 309 aaPredicted RBP9.04□□□□□ -0.96
VPS8-227ENST00000625842 FAM219BQ5XKK7 198 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 PI4KAP42356 2102 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 C7orf71A4D174 169 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 A8MWV9 139 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 DEFB112Q30KQ8 113 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 C10orf105Q8TEF2 133 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 IGHV3-53P01767 116 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 RIPPLY3P57055 190 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 ZNF876PQ49A33 203 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 SBF2Q86WG5 1849 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 A0A0G2JMZ2 1700 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 LRRC37A2A6NM11 1700 aa9.04□□□□□ -0.96
VPS8-227ENST00000625842 TOMM40O96008 361 aa9.03□□□□□ -0.96
VPS8-227ENST00000625842 PSG3Q16557 428 aa9.03□□□□□ -0.96
VPS8-227ENST00000625842 SPAG8Q99932 426 aaPredicted RBP9.03□□□□□ -0.96
VPS8-227ENST00000625842 ADAMTSL1Q8N6G6 1762 aa9.03□□□□□ -0.96
VPS8-227ENST00000625842 AWAT1Q58HT5 328 aa9.03□□□□□ -0.96
VPS8-227ENST00000625842 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms