RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
HOXA3-207ENST00000612286 HSBP1L1C9JCN9 74 aa11.43□□□□□ -0.58
HOXA3-207ENST00000612286 ESDP10768 282 aa11.43□□□□□ -0.58
HOXA3-207ENST00000612286 MDS2Q8NDY4 140 aa11.43□□□□□ -0.58
HOXA3-207ENST00000612286 KBTBD11-OT1A0A1B0GTJ5 212 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 TNFSF4P23510 183 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 BHLHA15Q7RTS1 189 aaPredicted RBP11.42□□□□□ -0.58
HOXA3-207ENST00000612286 P01737 135 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 UBE2V1Q13404 147 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 WFDC8Q8IUA0 241 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 TMEM70Q9BUB7 260 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 OTOGLQ3ZCN5 2332 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 LOC105371242A0A075B767 164 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 K7EMI3 77 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
HOXA3-207ENST00000612286 COL8A1P27658 744 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 HTR1DP28221 377 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 WT1-ASQ06250 92 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 OR10J3Q5JRS4 329 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 GOLT1AQ6ZVE7 132 aa11.42□□□□□ -0.58
HOXA3-207ENST00000612286 ZNF891A8MT65 544 aaPredicted RBP11.41□□□□□ -0.58
HOXA3-207ENST00000612286 UPK2O00526 184 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 RBP4P02753 201 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 CNTFRP26992 372 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 PATE2Q6UY27 113 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 C11orf52Q96A22 123 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 PRNDQ9UKY0 176 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 F11RQ9Y624 299 aaKnown RBP11.41□□□□□ -0.58
HOXA3-207ENST00000612286 CD69Q07108 199 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 IGKV3-15P01624 115 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 CHRDL1Q9BU40 450 aa11.41□□□□□ -0.58
HOXA3-207ENST00000612286 RBX1P62877 108 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 PRSS57Q6UWY2 283 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 OR1L4Q8NGR5 311 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 A0A1W2PRE2 83 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 SMIM27A0A1W2PRY6 76 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 NKX6-3A6NJ46 265 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 PRCDQ00LT1 54 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 TMUB1Q9BVT8 246 aa11.4□□□□□ -0.58
HOXA3-207ENST00000612286 COX7A1P24310 79 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 PLGLAQ15195 96 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 ZNF329Q86UD4 541 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 IGF2BP2-AS1Q96M15 143 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 FOXA2Q9Y261 457 aaPredicted RBP11.39□□□□□ -0.59
HOXA3-207ENST00000612286 ANKHD1Q8IWZ3 2542 aaKnown RBP11.39□□□□□ -0.59
HOXA3-207ENST00000612286 TRBV9A0A0B4J1U6 114 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 SPAARA0A1B0GVQ0 90 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 COTL1Q14019 142 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 DDB2Q92466 427 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 IGF2RP11717 2491 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 IGHV1-24A0A0C4DH33 117 aa11.39□□□□□ -0.59
HOXA3-207ENST00000612286 SRSF12Q8WXF0 261 aaKnown RBP11.39□□□□□ -0.59
HOXA3-207ENST00000612286 ZNF430Q9H8G1 570 aaPredicted RBP11.39□□□□□ -0.59
HOXA3-207ENST00000612286 LYNX1G3V0Z9 82 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 NBEAP1P0C6P0 100 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 LYNX1P0DP58 116 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 ACP1P24666 158 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 C17orf77Q96MU5 243 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 RNF7Q9UBF6 113 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 PTPRBP23467 1997 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 SAP30O75446 220 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 HIST1H1EP10412 219 aaKnown RBP11.38□□□□□ -0.59
HOXA3-207ENST00000612286 IGFL4Q6B9Z1 124 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 PRR7Q8TB68 274 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 FAM222BQ8WU58 562 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 GTSF1Q8WW33 167 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 ZNF257Q9Y2Q1 563 aa11.38□□□□□ -0.59
HOXA3-207ENST00000612286 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.38□□□□□ -0.592e-6■□□□□ 11.3
HOXA3-207ENST00000612286 OR1L8Q8NGR8 309 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 C18orf15Q96N68 181 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 C2orf70A6NJV1 201 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 GOSR1O95249 250 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 HBBP68871 147 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 KLF17Q5JT82 389 aaPredicted RBP11.37□□□□□ -0.59
HOXA3-207ENST00000612286 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 PRSS3P2Q8NHM4 247 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 SLC25A10Q9UBX3 287 aaPredicted RBP11.37□□□□□ -0.59
HOXA3-207ENST00000612286 RPUSD1Q9UJJ7 312 aaKnown RBP11.37□□□□□ -0.59
HOXA3-207ENST00000612286 TNRC6BQ9UPQ9 1833 aaKnown RBP11.37□□□□□ -0.59
HOXA3-207ENST00000612286 M0R3E3 92 aa11.37□□□□□ -0.59
HOXA3-207ENST00000612286 TRGV8A0A0C4DH27 118 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 IGHV3-23P01764 117 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 TMPRSS3P57727 454 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 LYPD2Q6UXB3 125 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 GRAMD2BQ96HH9 432 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 IGHV2-26A0A0B4J1V2 119 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 SYS1-DBNDD2H3BUS1 97 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 APOHP02749 345 aaPredicted RBP11.36□□□□□ -0.59
HOXA3-207ENST00000612286 OR5AL1P0C617 328 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 BPIFB3P59826 476 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 NHLH1Q02575 133 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
HOXA3-207ENST00000612286 EPDR1Q9UM22 224 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms