RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.44
LYSMD4-211ENST00000604213 LDLRAD2Q5SZI1 272 aa12.27□□□□□ -0.44
LYSMD4-211ENST00000604213 AMMECR1LQ6DCA0 310 aa12.27□□□□□ -0.44
LYSMD4-211ENST00000604213 PET117Q6UWS5 81 aa12.27□□□□□ -0.44
LYSMD4-211ENST00000604213 RBPMS2Q6ZRY4 209 aaKnown RBP12.27□□□□□ -0.44
LYSMD4-211ENST00000604213 STXBP6Q8NFX7 210 aa12.27□□□□□ -0.44
LYSMD4-211ENST00000604213 NDFIP1Q9BT67 221 aa12.27□□□□□ -0.44
LYSMD4-211ENST00000604213 ZNF137PP52743 207 aa12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 ETFRF1Q6IPR1 90 aa12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 VHLLQ6RSH7 139 aa12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 ZNF788Q6ZQV5 615 aa12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 LHFPL4Q7Z7J7 247 aa12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 TMEM167AQ8TBQ9 72 aa12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 PERPQ96FX8 193 aa12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 MCRIP2Q9BUT9 160 aaKnown RBP12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
LYSMD4-211ENST00000604213 ZNF138P52744 262 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 ZCCHC24Q8N2G6 241 aaKnown RBP12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 OR5AN1Q8NGI8 311 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 FMC1Q96HJ9 113 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 MAP1LC3CQ9BXW4 147 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 PROCRQ9UNN8 238 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 M0R1B8 84 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 CD5LO43866 347 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 NBEAP1P0C6P0 100 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 ORM2P19652 201 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 RUSC1-AS1Q66K80 236 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 H1FXQ92522 213 aaKnown RBP12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 MS4A6AQ9H2W1 248 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 CADP27708 2225 aa12.26□□□□□ -0.45
LYSMD4-211ENST00000604213 C22orf46C9J442 243 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 SP9P0CG40 484 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 GLRXP35754 106 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 SUB1P53999 127 aaKnown RBP eCLIP12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 C1orf210Q8IVY1 113 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 FLYWCH2Q96CP2 140 aaKnown RBP12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 RAI1Q7Z5J4 1906 aaPredicted RBP12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 IGLV3-9A0A075B6K5 115 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 A0A087X0K7 114 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 PSG9Q00887 426 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 C5orf17Q8NAS9 161 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 OR1B1Q8NGR6 318 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 OR4A5Q8NH83 315 aa12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 INTS1Q8N201 2190 aaKnown RBP12.25□□□□□ -0.45
LYSMD4-211ENST00000604213 hADV38S2A0JD32 116 aa12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 CHEK1O14757 476 aa12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 TOX4O94842 621 aa12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 APOHP02749 345 aaPredicted RBP12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 TCRAP04437 139 aa12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 HIST1H1AQ02539 215 aaPredicted RBP12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 DAZAP1Q96EP5 407 aaKnown RBP12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 TMUB1Q9BVT8 246 aa12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 HSPB8Q9UJY1 196 aa12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 WDFY4Q6ZS81 3184 aa12.24□□□□□ -0.45
LYSMD4-211ENST00000604213 FAM231BA6NCW3 169 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 NPIPB6E9PJ23 425 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 GP9P14770 177 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 TNFAIP6P98066 277 aaPredicted RBP12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 LINC01545Q5VT33 79 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 VPS25Q9BRG1 176 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 LINC00312Q9Y6C7 94 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 NAV3Q8IVL0 2385 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 OVOL3O00110 214 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 HAX1O00165 279 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 IGLV2-23P01705 113 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 IGHV1-46P01743 117 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 SARAFQ96BY9 339 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 ARRDC1-AS1Q9H2J1 176 aa12.23□□□□□ -0.45
LYSMD4-211ENST00000604213 TRAV8-6A0A0B4J262 113 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 H0Y8G0 127 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 H3BTX0 84 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 GPR183P32249 361 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 FOXE3Q13461 319 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 OR4C13Q8NGP0 309 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 VSTM2AQ8TAG5 236 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 PMCHL2Q9BQD1 86 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 Q9H3A6 140 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 CRYGCP07315 174 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 C2orf91Q6ZV80 131 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 NEU4Q8WWR8 484 aaPredicted RBP12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 DYSFO75923 2080 aa12.22□□□□□ -0.45
LYSMD4-211ENST00000604213 A0A1W2PPI3 338 aa12.21□□□□□ -0.45
LYSMD4-211ENST00000604213 FAM87AP0C7U9 286 aa12.21□□□□□ -0.45
LYSMD4-211ENST00000604213 COX8AP10176 69 aa12.21□□□□□ -0.45
LYSMD4-211ENST00000604213 CD59P13987 128 aa12.21□□□□□ -0.45
LYSMD4-211ENST00000604213 DIAPH2-AS1Q14236 149 aa12.21□□□□□ -0.45
LYSMD4-211ENST00000604213 HES3Q5TGS1 186 aa12.21□□□□□ -0.45
LYSMD4-211ENST00000604213 DHRS13Q6UX07 377 aa12.21□□□□□ -0.45
LYSMD4-211ENST00000604213 TRGV9Q99603 122 aa12.21□□□□□ -0.45
LYSMD4-211ENST00000604213 ARF6P62330 175 aa12.21□□□□□ -0.46
LYSMD4-211ENST00000604213 TEX36Q5VZQ5 186 aa12.21□□□□□ -0.46
LYSMD4-211ENST00000604213 C16orf54Q6UWD8 224 aa12.21□□□□□ -0.46
LYSMD4-211ENST00000604213 SEM1Q6ZVN7 128 aa12.21□□□□□ -0.46
LYSMD4-211ENST00000604213 Q86TA4 180 aa12.21□□□□□ -0.46
LYSMD4-211ENST00000604213 CCL3L1P16619 93 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 FAM71F2Q6NXP2 309 aa12.2□□□□□ -0.46
LYSMD4-211ENST00000604213 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms