RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 PCNX2A6NKB5 2137 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 CABIN1Q9Y6J0 2220 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 SPTBN4Q9H254 2564 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 TRBV19A0A075B6N1 114 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 IGHV5-10-1A0A0J9YXX1 117 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 IFNA7P01567 189 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 TRAPPC2P0DI81 140 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 TRAPPC2BP0DI82 140 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 BCL2P10415 239 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 CRHBPP24387 322 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 HERPUD1Q15011 391 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 MMDQ15546 238 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 GLIPR1L1Q6UWM5 242 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 HRCT1Q6UXD1 115 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 ZNF695Q8IW36 515 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 C20orf203Q8NBC4 194 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.38□□□□□ -1.71
VMP1-215ENST00000592619 OR11G2Q8NGC1 345 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 RNF122Q9H9V4 155 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 ZNF331Q9NQX6 463 aaPredicted RBP4.38□□□□□ -1.71
VMP1-215ENST00000592619 CCL28Q9NRJ3 127 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 TP53TG3Q9ULZ0 132 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 SIGLEC7Q9Y286 467 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 ZFHX4Q86UP3 3567 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 CFAP47Q6ZTR5 3102 aa4.38□□□□□ -1.71
VMP1-215ENST00000592619 TRAV4A0A0B4J268 109 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 PNMA8CA0A1B0GUJ8 204 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 LOC100130705A0A1B0GUX0 176 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 TLCD2A6NGC4 264 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 UBFD1O14562 309 aaKnown RBP4.37□□□□□ -1.71
VMP1-215ENST00000592619 FFAR1O14842 300 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 KCNK2O95069 426 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 CXorf1O96002 111 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 C1QAP02745 245 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 CECR9P0C854 216 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 P0DMU3 169 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 FAM231AP0DMU4 169 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 FAM231CP0DMU5 169 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 NTF3P20783 257 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 PPP1CCP36873 323 aaKnown RBP4.37□□□□□ -1.71
VMP1-215ENST00000592619 ATP5G3P48201 142 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 LYZP61626 148 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 RPS23P62266 143 aaKnown RBP4.37□□□□□ -1.71
VMP1-215ENST00000592619 PYY3Q5JQD4 70 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 GLT8D1Q68CQ7 371 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 LINC00299Q6ZSB3 139 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 PACRGLQ8N7B6 248 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 RBPMSQ93062 196 aaKnown RBP4.37□□□□□ -1.71
VMP1-215ENST00000592619 IMMP1LQ96LU5 166 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 EIF5A2Q9GZV4 153 aaKnown RBP4.37□□□□□ -1.71
VMP1-215ENST00000592619 KCNIP2Q9NS61 270 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 RBM12B-AS1Q9P1G2 102 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 FIS1Q9Y3D6 152 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 LAMA5O15230 3695 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 FRYQ5TBA9 3013 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 KNL1Q8NG31 2342 aa4.37□□□□□ -1.71
VMP1-215ENST00000592619 AGRNO00468 2067 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 DHRS12A0PJE2 317 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 TMEM72A0PK05 275 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 TMEM212A6NML5 194 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 H3BP45 60 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 PSPHP1O15172 72 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 ANGPTL7O43827 346 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 DPM2O94777 84 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 NCR2O95944 276 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 AKAIN1P0CW23 69 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 PPIBP23284 216 aaKnown RBP4.36□□□□□ -1.71
VMP1-215ENST00000592619 S100A2P29034 98 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 RBMXP38159 391 aaKnown RBP4.36□□□□□ -1.71
VMP1-215ENST00000592619 LPAR6P43657 344 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 GFERP55789 205 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 NDUFA6P56556 154 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 GNB2P62879 340 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 SLC38A11Q08AI6 406 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 HSD52Q0P140 79 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 LRRC10Q5BKY1 277 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 CLLU1Q5K131 121 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 FAM222AQ5U5X8 452 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 TMEM236Q5W0B7 351 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 Q5XG85 94 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 KDM4DQ6B0I6 523 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 AMMECR1LQ6DCA0 310 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 RPL22L1Q6P5R6 122 aaKnown RBP4.36□□□□□ -1.71
VMP1-215ENST00000592619 ZNF584Q8IVC4 421 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 TMEM61Q8N0U2 210 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 OR4K5Q8NGD3 323 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 OR51H1Q8NH63 302 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 FNDC9Q8TBE3 224 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 LRRC29Q8WV35 223 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 RTL8AQ9BWD3 113 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 PXMP4Q9Y6I8 212 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 RP1P56715 2156 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 AKAP13Q12802 2813 aa4.36□□□□□ -1.71
VMP1-215ENST00000592619 CELSR3Q9NYQ7 3312 aa4.35□□□□□ -1.71
VMP1-215ENST00000592619 TRAV8-3A0A0A6YYJ7 113 aa4.35□□□□□ -1.71
VMP1-215ENST00000592619 A0A1W2PNU3 283 aaPredicted RBP4.35□□□□□ -1.71
VMP1-215ENST00000592619 KLLNB2CW77 178 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms