RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 PTTG1O95997 202 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 APOHP02749 345 aaPredicted RBP8.9□□□□□ -0.98
LIG3-213ENST00000590630 HNRNPCP07910 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
LIG3-213ENST00000590630 VAMP2P63027 116 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 PAFAH1B2P68402 229 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 AKR1C1Q04828 323 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 USF2Q15853 346 aaPredicted RBP8.9□□□□□ -0.98
LIG3-213ENST00000590630 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 TCF24Q7RTU0 167 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 OR10P1Q8NGE3 313 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 RNF125Q96EQ8 232 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 FAM110AQ9BQ89 295 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 LSM5Q9Y4Y9 91 aaKnown RBP8.9□□□□□ -0.98
LIG3-213ENST00000590630 TENM3Q9P273 2699 aa8.9□□□□□ -0.98
LIG3-213ENST00000590630 PMS2P5A8MQ11 134 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 FNDC10F2Z333 226 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 DFFBO76075 338 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 CFDP00746 253 aaPredicted RBP8.89□□□□□ -0.99
LIG3-213ENST00000590630 METTL15P1P0C7V9 234 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 PVALBP20472 110 aaPredicted RBP8.89□□□□□ -0.99
LIG3-213ENST00000590630 NUP62P37198 522 aaPredicted RBP8.89□□□□□ -0.99
LIG3-213ENST00000590630 P2RY1P47900 373 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 DLK1P80370 383 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 ZNF90Q03938 601 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 IL15RAQ13261 267 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 Q6ZNX1 250 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 TMEM144Q7Z5S9 345 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 SBSPONQ8IVN8 264 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 DEFB125Q8N687 156 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 ASCL2Q99929 193 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 WFDC10AQ9H1F0 79 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 PFDN2Q9UHV9 154 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 RABAC1Q9UI14 185 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 U3KQE9 123 aa8.89□□□□□ -0.99
LIG3-213ENST00000590630 TRAV2A0A0B4J234 112 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 IGHV3-66A0A0C4DH42 116 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 GOSR2O14653 212 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 EIF2B2P49770 351 aaKnown RBP8.88□□□□□ -0.99
LIG3-213ENST00000590630 CMC4P56277 68 aaPredicted RBP8.88□□□□□ -0.99
LIG3-213ENST00000590630 S100A10P60903 97 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 RPL11P62913 178 aaKnown RBP8.88□□□□□ -0.99
LIG3-213ENST00000590630 CYCSP99999 105 aaKnown RBP8.88□□□□□ -0.99
LIG3-213ENST00000590630 LILRB2Q8N423 598 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 GGACTQ9BVM4 153 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 NMES1Q9C002 83 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 SRD5A3Q9H8P0 318 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 MGAT4CQ9UBM8 478 aa8.88□□□□□ -0.99
LIG3-213ENST00000590630 IGKV3-7A0A075B6H7 116 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 SMCO3A2RU48 225 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 HELTA6NFD8 242 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 BUB3O43684 328 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 SSNA1O43805 119 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 ATP6V1G1O75348 118 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 CCNKO75909 580 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 CAV2P51636 162 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 RAB32Q13637 225 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 C16orf54Q6UWD8 224 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 LINC00322Q6ZN03 302 aaPredicted RBP8.87□□□□□ -0.99
LIG3-213ENST00000590630 PBDC1Q9BVG4 233 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 C11orf1Q9H5F2 150 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 ZMAT4Q9H898 229 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 NPVFQ9HCQ7 196 aa8.87□□□□□ -0.99
LIG3-213ENST00000590630 LYRM2Q9NU23 88 aaPredicted RBP8.87□□□□□ -0.99
LIG3-213ENST00000590630 DNASE2O00115 360 aaPredicted RBP8.86□□□□□ -0.99
LIG3-213ENST00000590630 DEDDO75618 318 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 SIX6O95475 246 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 TFPI2P48307 235 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 BCAP31P51572 246 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 AP2S1P53680 142 aaPredicted RBP8.86□□□□□ -0.99
LIG3-213ENST00000590630 LYZP61626 148 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 RRAS2P62070 204 aaPredicted RBP8.86□□□□□ -0.99
LIG3-213ENST00000590630 OR2F1Q13607 317 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 HAGHQ16775 308 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 GBGT1Q8N5D6 347 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 BPIFCQ8NFQ6 507 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 TM2D3Q9BRN9 247 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 SLC45A2Q9UMX9 530 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 U3KQK5 164 aa8.86□□□□□ -0.99
LIG3-213ENST00000590630 RBMY1BA6NDE4 496 aaKnown RBP8.85□□□□□ -0.99
LIG3-213ENST00000590630 RBMY1EA6NEQ0 496 aaKnown RBP8.85□□□□□ -0.99
LIG3-213ENST00000590630 RLN2P04090 185 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 RBMY1DP0C7P1 496 aaKnown RBP8.85□□□□□ -0.99
LIG3-213ENST00000590630 S100A7P31151 101 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 SULT1A1P50225 295 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 H2BFSP57053 126 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 SELENOTP62341 195 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 ARL16Q0P5N6 197 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 C1orf194Q5T5A4 169 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 STX12Q86Y82 276 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 STXBP6Q8NFX7 210 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 FBXL17Q9UF56 701 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 UBQLN2Q9UHD9 624 aa8.85□□□□□ -0.99
LIG3-213ENST00000590630 LOC102724200A0A096LPH7 203 aaPredicted RBP8.84□□□□□ -0.99
LIG3-213ENST00000590630 FAM24AA6NFZ4 105 aa8.84□□□□□ -0.99
LIG3-213ENST00000590630 CST7O76096 145 aa8.84□□□□□ -0.99
LIG3-213ENST00000590630 HBG1P69891 147 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms