RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TMEM106BQ9NUM4 274 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 NAGKQ9UJ70 344 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 FUT9Q9Y231 359 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 CBY1Q9Y3M2 126 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 TRAPPC1Q9Y5R8 145 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 NCOA6Q14686 2063 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 CHD7Q9P2D1 2997 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 CACNA1CQ13936 2221 aa2.95□□□□□ -1.94
SMCHD1-208ENST00000583344 TRANK1O15050 2925 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 TRGV10A0A0A0MS01 117 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 TRBV9A0A0B4J1U6 114 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 ODAMA1E959 279 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 C5orf49A4QMS7 147 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 C9JCJ5 164 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 C11orf94C9JXX5 98 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 FNDC10F2Z333 226 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 H3BP45 60 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 CDIPTO14735 213 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 TNFSF12O43508 249 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 NUPR1O60356 82 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 SNRPCP09234 159 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 OR10J4P0C629 311 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 STAG3L2P0CL84 134 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 TUBG1P23258 451 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 IL3RAP26951 378 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 CD82P27701 267 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 SAA4P35542 130 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 OPRK1P41145 380 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 RAB9AP51151 201 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 NDUFV3P56181 108 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 TPPP2P59282 170 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 RPL19P84098 196 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 CATR1Q13166 79 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 GUSBP11Q6P575 273 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 C19orf35Q6ZS72 473 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF709Q8N972 641 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 OR1L6Q8NGR2 347 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 OR1B1Q8NGR6 318 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 OR1L1Q8NH94 360 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 DTD1Q8TEA8 209 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 C11orf52Q96A22 123 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 RPUSD4Q96CM3 377 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 SFRP2Q96HF1 295 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 TBX15Q96SF7 602 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 GNB1LQ9BYB4 327 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 HES4Q9HCC6 221 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 ESM1Q9NQ30 184 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 TUBG2Q9NRH3 451 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 IL36BQ9NZH7 164 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 OR1A1Q9P1Q5 309 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 PEF1Q9UBV8 284 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 GOLT1BQ9Y3E0 138 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 CSDC2Q9Y534 153 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 ARL2-SNX15V9GYD0 113 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 REV3LO60673 3130 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 FER1L5A0AVI2 2057 aa2.94□□□□□ -1.94
SMCHD1-208ENST00000583344 TNRC6BQ9UPQ9 1833 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 RALGAPA1Q6GYQ0 2036 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 KIAA1549Q9HCM3 1950 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 TRAV25A0A0B4J276 109 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 UBE2L5PA0A1B0GUS4 154 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 A0A1W2PPV4 95 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 ITGB1BP1O14713 200 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 RBFOX2O43251 390 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 TNFSF15O95150 251 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 OR2H2O95918 312 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 CXorf1O96002 111 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 PRB2P02812 416 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 GPX1P07203 203 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 ZNF25P17030 456 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 KITLGP21583 273 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 BRS3P32247 399 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 CDC34P49427 236 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 CYB561P49447 251 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 DUSP3P51452 185 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 CLDN18P56856 261 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 PLP1P60201 277 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 PPP1CBP62140 327 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 RPL30P62888 115 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 MRPS11P82912 194 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 PLGLB1Q02325 96 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 GABRA6Q16445 453 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 PRSS8Q16651 343 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 OR10J3Q5JRS4 329 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 TPTE2P1Q5T6R2 138 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 FAM78BQ5VT40 261 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 OR8G2PQ6IF36 304 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 TMEM256Q8N2U0 113 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 PNKDQ8N490 385 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 NECAP1Q8NC96 275 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 SGMS2Q8NHU3 365 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 GALMQ96C23 342 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 HSD17B10Q99714 261 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 FAM173AQ9BQD7 235 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 TMEM208Q9BTX3 173 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 C19orf24Q9BVV8 132 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 RTL8AQ9BWD3 113 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 SFXN3Q9BWM7 321 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 NPVFQ9HCQ7 196 aa2.93□□□□□ -1.94
SMCHD1-208ENST00000583344 OSTCQ9NRP0 149 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms