RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-222	ENST00000582594	ZNF835	Q9Y2P0	537 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TRAV8-1	A0A0A6YYK1	113 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TRAV8-6	A0A0B4J262	113 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	IGLV1-44	P01699	117 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	UQCRFS1	P47985	274 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	BHLHA15	Q7RTS1	189 aa	Predicted RBP	7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	ATP5L2	Q7Z4Y8	100 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	DEFB125	Q8N687	156 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	GAFA1	Q96PS6	74 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	GSX1	Q9H4S2	264 aa	Predicted RBP	7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	SCRT2	Q9NQ03	307 aa		7.71	□□□□□ -1.18
PPP4R1-222	ENST00000582594	FSTL3	O95633	263 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	LHB	P01229	141 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	SLC25A48	Q6ZT89	311 aa	Known RBP	7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	DEFB123	Q8N688	67 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TEX45	Q8NA69	505 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	DAZAP1	Q96EP5	407 aa	Known RBP	7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	GPR82	Q96P67	336 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	MAP1LC3C	Q9BXW4	147 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TECTA	O75443	2155 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CGB1	A6NKQ9	187 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594		A8MWL6	223 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	APOA2	P02652	100 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CCL3L1	P16619	93 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CCL11	P51671	97 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	HCP5	Q6MZN7	132 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	DHRS13	Q6UX07	377 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CIART	Q8N365	385 aa	Predicted RBP	7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CACNG8	Q8WXS5	425 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	ARRDC1-AS1	Q9H2J1	176 aa		7.7	□□□□□ -1.18
PPP4R1-222	ENST00000582594	ROS1	P08922	2347 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	DCHS1	Q96JQ0	3298 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CRX	O43186	299 aa	Predicted RBP	7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	KLK10	O43240	276 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	FAM87A	P0C7U9	286 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	MYCNOS	P40205	109 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	ARF6	P62330	175 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	GUSBP1	Q15486	140 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CHCHD1	Q96BP2	118 aa	Known RBP	7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	FLYWCH2	Q96CP2	140 aa	Known RBP	7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	NAA38	Q9BRA0	125 aa	Known RBP	7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RPUSD1	Q9UJJ7	312 aa	Known RBP	7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	hADV38S2	A0JD32	116 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	C22orf46	C9J442	243 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	NBEAP1	P0C6P0	100 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	SRSF6	Q13247	344 aa	Known RBP	7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	C12orf54	Q6X4T0	127 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RAB9B	Q9NP90	201 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TPSG1	Q9NRR2	321 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RNF7	Q9UBF6	113 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	SSUH2	Q9Y2M2	353 aa		7.69	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PPIAL4D	F5H284	164 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	NCR2	O95944	276 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PPBP	P02775	128 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	FAM162B	Q5T6X4	162 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	ZNF71	Q9NQZ8	489 aa	Predicted RBP	7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PROCR	Q9UNN8	238 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	SLC25A15	Q9Y619	301 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RP1L1	Q8IWN7	2480 aa	Predicted RBP	7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	GAGE12B	A1L429	117 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	LIPF	P07098	398 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	HTR1D	P28221	377 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	GPR183	P32249	361 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CFHR2	P36980	270 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TNFAIP6	P98066	277 aa	Predicted RBP	7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RBPMS2	Q6ZRY4	209 aa	Known RBP	7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	C1orf162	Q8NEQ5	155 aa	Predicted RBP	7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	MLST8	Q9BVC4	326 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594		Q9H3A6	140 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CFAP47	Q6ZTR5	3102 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	SAP30	O75446	220 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	WT1	P19544	449 aa	Predicted RBP	7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	COL8A1	P27658	744 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RIPPLY3	P57055	190 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PRNT	Q86SH4	94 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PERP	Q96FX8	193 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RITA1	Q96K30	269 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TPPP3	Q9BW30	176 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PRSS22	Q9GZN4	317 aa		7.68	□□□□□ -1.18
PPP4R1-222	ENST00000582594	IGHV3-72	A0A0B4J1Y9	119 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	C19orf71	A6NCJ1	209 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	SLC25A17	O43808	307 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	HLA-DRB1	P01911	266 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	APOH	P02749	345 aa	Predicted RBP	7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	OR5AL1	P0C617	328 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	HIST1H1A	Q02539	215 aa	Predicted RBP	7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	SMIM15	Q7Z3B0	74 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	OSR1	Q8TAX0	266 aa	Predicted RBP	7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	C1RL	Q9NZP8	487 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	C7orf71	A4D174	169 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	CD5L	O43866	347 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TCRA	P04437	139 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	ATP5I	P56385	69 aa	Predicted RBP	7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	FXYD7	P58549	80 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	PET117	Q6UWS5	81 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	ZNF833P	Q6ZTB9	187 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	ZCCHC24	Q8N2G6	241 aa	Known RBP	7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	EXOC3-AS1	Q8N2X6	119 aa		7.67	□□□□□ -1.18
PPP4R1-222	ENST00000582594	TMEM116	Q8NCL8	245 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms