RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 LINC00612Q8N6U2 182 aa9.31□□□□□ -0.92
CSNK1D-213ENST00000580446 OR51G1Q8NGK1 321 aa9.31□□□□□ -0.92
CSNK1D-213ENST00000580446 RNASE8Q8TDE3 154 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-213ENST00000580446 Q9HAA7 133 aa9.31□□□□□ -0.92
CSNK1D-213ENST00000580446 A8MTW9 85 aa9.3□□□□□ -0.92
CSNK1D-213ENST00000580446 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-213ENST00000580446 CCNKO75909 580 aa9.3□□□□□ -0.92
CSNK1D-213ENST00000580446 OR10J1P30954 320 aa9.3□□□□□ -0.92
CSNK1D-213ENST00000580446 RND2P52198 227 aa9.3□□□□□ -0.92
CSNK1D-213ENST00000580446 C1orf146Q5VVC0 180 aa9.3□□□□□ -0.92
CSNK1D-213ENST00000580446 CHAC1Q9BUX1 264 aa9.3□□□□□ -0.92
CSNK1D-213ENST00000580446 PBDC1Q9BVG4 233 aa9.3□□□□□ -0.92
CSNK1D-213ENST00000580446 CRYGDP07320 174 aa9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 TAS2R60P59551 318 aa9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 GNG2P59768 71 aa9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 HSPE1P61604 102 aaKnown RBP9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 RPS25P62851 125 aaKnown RBP9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 LYPD5Q6UWN5 251 aa9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 AHSA2Q719I0 299 aa9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 OR6F1Q8NGZ6 308 aa9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 RPRMQ9NS64 109 aa9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 V9GY05 133 aa9.29□□□□□ -0.92
CSNK1D-213ENST00000580446 IGLV2-11P01706 119 aa9.28□□□□□ -0.92
CSNK1D-213ENST00000580446 RLN2P04090 185 aa9.28□□□□□ -0.92
CSNK1D-213ENST00000580446 Q6ZTI0 123 aa9.28□□□□□ -0.92
CSNK1D-213ENST00000580446 NANOGP1Q8N7R0 232 aa9.28□□□□□ -0.92
CSNK1D-213ENST00000580446 TSC22D3Q99576 134 aa9.28□□□□□ -0.92
CSNK1D-213ENST00000580446 LPAP08519 4548 aa9.28□□□□□ -0.92
CSNK1D-213ENST00000580446 SMIM30A4D0T7 59 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 ZNF98A6NK75 572 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 SCGB2A1O75556 95 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 IGKV1-39P01597 117 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 IGKV1D-39P04432 117 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 EVI2AP22794 236 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 PRSS54Q6PEW0 395 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 RNF182Q8N6D2 247 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 SLC35G3Q8N808 338 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 BEST4Q8NFU0 473 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 OR1S2Q8NGQ3 325 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 TMEM263Q8WUH6 116 aaKnown RBP9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 C16orf92Q96LL3 132 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 ICOSQ9Y6W8 199 aa9.27□□□□□ -0.93
CSNK1D-213ENST00000580446 METTL21EPA6NDL7 271 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 BOLA2-SMG1P6H3BVE0 249 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 ISLRO14498 428 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 GSTZ1O43708 216 aaPredicted RBP9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 ADAP1O75689 374 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 NXPH3O95157 252 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 ETV6P41212 452 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 B2MP61769 119 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 GPR141Q7Z602 305 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 IL22RA2Q969J5 263 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 MRGPRFQ96AM1 343 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 SEC22AQ96IW7 307 aa9.26□□□□□ -0.93
CSNK1D-213ENST00000580446 TRAV30A0A087WSZ9 112 aa9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 IGHV3-53P01767 116 aa9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 RD3LP0DJH9 198 aa9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 PSG1P11464 419 aa9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 RAB6AP20340 208 aa9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 YPEL3P61236 119 aaPredicted RBP9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 PHLDA2Q53GA4 152 aa9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 ARRDC1Q8N5I2 433 aa9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 RCL1Q9Y2P8 373 aaKnown RBP9.25□□□□□ -0.93
CSNK1D-213ENST00000580446 PAX4O43316 350 aa9.24□□□□□ -0.93
CSNK1D-213ENST00000580446 HERV-K104P61576 105 aa9.24□□□□□ -0.93
CSNK1D-213ENST00000580446 RHOBP62745 196 aa9.24□□□□□ -0.93
CSNK1D-213ENST00000580446 LAIR2Q6ISS4 152 aa9.24□□□□□ -0.93
CSNK1D-213ENST00000580446 SFXN4Q6P4A7 337 aa9.24□□□□□ -0.93
CSNK1D-213ENST00000580446 ACY3Q96HD9 319 aa9.24□□□□□ -0.93
CSNK1D-213ENST00000580446 CORTO00230 105 aa9.23□□□□□ -0.93
CSNK1D-213ENST00000580446 TOMM40O96008 361 aa9.23□□□□□ -0.93
CSNK1D-213ENST00000580446 HSPA13P48723 471 aa9.23□□□□□ -0.93
CSNK1D-213ENST00000580446 HIST1H1AQ02539 215 aaPredicted RBP9.23□□□□□ -0.93
CSNK1D-213ENST00000580446 ZNF493Q6ZR52 646 aa9.23□□□□□ -0.93
CSNK1D-213ENST00000580446 CCDC197Q8NCU1 140 aa9.23□□□□□ -0.93
CSNK1D-213ENST00000580446 ZNF555Q8NEP9 628 aa9.23□□□□□ -0.93
CSNK1D-213ENST00000580446 PARD6GQ9BYG4 376 aaPredicted RBP9.23□□□□□ -0.93
CSNK1D-213ENST00000580446 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 MEIS3P1A6NDR6 274 aa9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 ZNF182P17025 639 aaPredicted RBP9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 SUB1P53999 127 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 FABP5Q01469 135 aa9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 ZNF415Q09FC8 603 aa9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 TBCEQ15813 527 aaPredicted RBP9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 TMEM256Q8N2U0 113 aa9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 LRTM2Q8N967 370 aa9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 NPIPB3Q92617 1050 aa9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 DAPK2Q9UIK4 370 aa9.22□□□□□ -0.93
CSNK1D-213ENST00000580446 TRAV8-2A0A0B4J237 113 aa9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 IFITM5A6NNB3 132 aa9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 PRAF2O60831 178 aa9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 ARL6IP5O75915 188 aa9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 DUSP14O95147 198 aaKnown RBP9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 HSMCR30P0CW71 290 aa9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 GAMTQ14353 236 aa9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 CYGBQ8WWM9 190 aa9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 FXYD6Q9H0Q3 95 aa9.21□□□□□ -0.94
CSNK1D-213ENST00000580446 PSORS1C1Q9UIG5 152 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms