RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	FABP5P3	A8MUU1	101 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243		A8MWP6	167 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	LEUTX	A8MZ59	168 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM25A	B3EWG3	89 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM25C	B3EWG5	89 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM25G	B3EWG6	89 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	LY6L	H3BQJ8	138 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243		H3BT86	120 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243		K7ERU9	68 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	TXNDC9	O14530	226 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SYNGR2	O43760	224 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SH2D1A	O60880	128 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	DPM2	O94777	84 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	DBI	P07108	87 aa	Known RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	PAEP	P09466	180 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	PTHLH	P12272	177 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SLC25A16	P16260	332 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	NPPC	P23582	126 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SDC2	P34741	201 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	RPL27A	P46776	148 aa	Known RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	EIF2B2	P49770	351 aa	Known RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	DYNLT3	P51808	116 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	FOXA1	P55317	472 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	RPS25	P62851	125 aa	Known RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	RPS28	P62857	69 aa	Known RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	CCL20	P78556	96 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	WHAMMP3	Q1A5X7	153 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SCGB2B2	Q4G0G5	96 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	MORN2	Q502X0	79 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	LDLRAD2	Q5SZI1	272 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	C1orf140	Q5VVS0	124 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	RPL22L1	Q6P5R6	122 aa	Known RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SOSTDC1	Q6X4U4	206 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF705A	Q6ZN79	300 aa	Predicted RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SDIM1	Q6ZPB5	146 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	IDO2	Q6ZQW0	420 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	C2orf91	Q6ZV80	131 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SNX29P2	Q8IUI4	249 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	MSRB3	Q8IXL7	192 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	CNEP1R1	Q8N9A8	125 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	WFDC11	Q8NEX6	87 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	NUP35	Q8NFH5	326 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	OR4E2	Q8NGC2	313 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	OR51A4	Q8NGJ6	313 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	OR8D4	Q8NGM9	314 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	OR13C4	Q8NGS5	318 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	TERB2	Q8NHR7	220 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	PPTC7	Q8NI37	304 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	MUC7	Q8TAX7	377 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	FGF13	Q92913	245 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	ARL11	Q969Q4	196 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	ISOC1	Q96CN7	298 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	C14orf144	Q96I85	54 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	TEX37	Q96LM6	180 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	PRADC1	Q9BSG0	188 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	UPK3B	Q9BT76	320 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	C1QTNF6	Q9BXI9	259 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	MRPL32	Q9BYC8	188 aa	Known RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	LINC00470	Q9BZP3	86 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	NKX6-2	Q9C056	277 aa	Predicted RBP	0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	YIPF3	Q9GZM5	350 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	IMUP	Q9GZP8	106 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	TAF9B	Q9HBM6	251 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	CBLN4	Q9NTU7	201 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	SLC39A9	Q9NUM3	307 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	OR5AC2	Q9NZP5	309 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	CALML5	Q9NZT1	146 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	NAT8	Q9UHE5	227 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	GNG8	Q9UK08	70 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	EPDR1	Q9UM22	224 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	BAIAP2	Q9UQB8	552 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	COL18A1	P39060	1754 aa		0.9	□□□□□ -2.27
UBR1-209	ENST00000569243	FMN1	Q68DA7	1419 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	ATAD5	Q96QE3	1844 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	MYO9B	Q13459	2157 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	CCDC88A	Q3V6T2	1871 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	MAST2	Q6P0Q8	1798 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	CEP164	Q9UPV0	1460 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	WDR7	Q9Y4E6	1490 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	CCNB3	Q8WWL7	1395 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	MED23	Q9ULK4	1368 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	TRAV5	A0A0B4J249	113 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	TRAV38-1	A0A0B4J264	116 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	C9orf170	A2RU37	121 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	C17orf98	A8MV24	154 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	SMIM24	O75264	130 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM107A	O95990	144 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	IFNA10	P01566	189 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	IGHV1-69	P01742	117 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	IGHV3-7	P01780	117 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	C1QA	P02745	245 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	SCT	P09683	121 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	UCHL1	P09936	223 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	IGLC6	P0CF74	106 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	CCL5	P13501	91 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF22	P17026	224 aa	Predicted RBP	0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	EVI2A	P22794	236 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	S100A4	P26447	101 aa	Known RBP	0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	ATP6V0C	P27449	155 aa		0.89	□□□□□ -2.27
UBR1-209	ENST00000569243	RNASE4	P34096	147 aa	Known RBP	0.89	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms