RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 KRTDAPP60985 99 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 RPS15AP62244 130 aaKnown RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 CSNK1G2P78368 415 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 BAXQ07812 192 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 TMEM267Q0VDI3 215 aaPredicted RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 ZNF266Q14584 549 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 GNMTQ14749 295 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 HIST3H3Q16695 136 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 C5orf64Q2M2E5 130 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 KRTAP21-3Q3LHN1 58 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 ZNF658BQ4V348 819 aaPredicted RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 LRRC10Q5BKY1 277 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 VAX1Q5SQQ9 334 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 RAET1LQ5VY80 246 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 OTPQ5XKR4 325 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 CARD17Q5XLA6 110 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 RFLNAQ6ZTI6 216 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 GTF2H5Q6ZYL4 71 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 MRPL21Q7Z2W9 205 aaKnown RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 TMEM144Q7Z5S9 345 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 BAGE3Q86Y29 109 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 BAGE2Q86Y30 109 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 C20orf196Q8IYI0 205 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 TMEM256Q8N2U0 113 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 OR4P4Q8NGL7 312 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 OR5H2Q8NGV7 314 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 OR6K6Q8NGW6 343 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 PFN4Q8NHR9 129 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 ST8SIA1Q92185 356 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 TMEM230Q96A57 120 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 MRGPRFQ96AM1 343 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 VSIG2Q96IQ7 327 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 AP1S3Q96PC3 154 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 YPEL2Q96QA6 119 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 PRSS27Q9BQR3 290 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 RTBDNQ9BSG5 229 aaPredicted RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 SH3BGRL3Q9H299 93 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 GPR84Q9NQS5 396 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 GNG13Q9P2W3 67 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 DPM3Q9P2X0 92 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 MRM2Q9UI43 246 aaKnown RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 ZNF443Q9Y2A4 671 aaPredicted RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 RCL1Q9Y2P8 373 aaKnown RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 KLF13Q9Y2Y9 288 aaPredicted RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 OR51B2Q9Y5P1 312 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 HEATR5BQ9P2D3 2071 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 INTS1Q8N201 2190 aaKnown RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 APCP25054 2843 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 DNAJC13O75165 2243 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 ITPR3Q14573 2671 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 MTORP42345 2549 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 IGLV3-12A0A075B6K2 115 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 TRAV27A0A087WT01 109 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 DUXBA0A1W2PPF3 345 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 A0A1W2PPV9 198 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 NKX2-6A6NCS4 301 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 FAM24AA6NFZ4 105 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 H3BSH0 61 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 K7EM74 188 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 M0R1X1 148 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 SIRPB1O00241 398 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 TAX1BP3O14907 124 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 RAB29O14966 203 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 CD5LO43866 347 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 NUPR1O60356 82 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 HAND1O96004 215 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 NRASP01111 189 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 KRASP01116 189 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 IFNA5P01569 189 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 GYPAP02724 150 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 TTRP02766 147 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 HMGN2P05204 90 aaKnown RBP2.69□□□□□ -1.98
CHD9-212ENST00000564641 REG1AP05451 166 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 DBIP07108 87 aaKnown RBP2.69□□□□□ -1.98
CHD9-212ENST00000564641 CRYGCP07315 174 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 CTSDP07339 412 aaPredicted RBP2.69□□□□□ -1.98
CHD9-212ENST00000564641 SLC35E2P0CK97 266 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 STAG3L2P0CL84 134 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 CD99P14209 185 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 HIST1H1CP16403 213 aaKnown RBP2.69□□□□□ -1.98
CHD9-212ENST00000564641 CRISP2P16562 243 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 CSNK2A2P19784 350 aaPredicted RBP2.69□□□□□ -1.98
CHD9-212ENST00000564641 TSPOP30536 169 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 GRPRP30550 384 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 CTRLP40313 264 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 PTGDSP41222 190 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 CYB561P49447 251 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 TAS2R30P59541 319 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 PPP1CAP62136 330 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 RPL23P62829 140 aaKnown RBP2.69□□□□□ -1.98
CHD9-212ENST00000564641 GNB2P62879 340 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 RPL32P62910 135 aaKnown RBP2.69□□□□□ -1.98
CHD9-212ENST00000564641 LCN2P80188 198 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 FUT5Q11128 374 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 PMCHL1Q16048 86 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 HLA-DRB5Q30154 266 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 DEFB110Q30KQ9 67 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 CCSMST1Q4G0I0 132 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 GLYATL3Q5SZD4 288 aa2.69□□□□□ -1.98
CHD9-212ENST00000564641 ZNF684Q5T5D7 378 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms