RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 MBNL3Q9NUK0 354 aaKnown RBP10.38□□□□□ -0.75
COMMD4-209ENST00000564068 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
COMMD4-209ENST00000564068 TNCP24821 2201 aa10.38□□□□□ -0.75
COMMD4-209ENST00000564068 TRAV8-1A0A0A6YYK1 113 aa10.38□□□□□ -0.75
COMMD4-209ENST00000564068 PRCDQ00LT1 54 aa10.38□□□□□ -0.75
COMMD4-209ENST00000564068 C5orf30Q96GV9 206 aa10.38□□□□□ -0.75
COMMD4-209ENST00000564068 MRPL27Q9P0M9 148 aaKnown RBP10.38□□□□□ -0.75
COMMD4-209ENST00000564068 V9GYV3 84 aa10.38□□□□□ -0.75
COMMD4-209ENST00000564068 PDLIM4P50479 330 aa10.37□□□□□ -0.75
COMMD4-209ENST00000564068 YLPM1P49750 1951 aaKnown RBP10.37□□□□□ -0.75
COMMD4-209ENST00000564068 IGHV3OR16-8A0A075B7F1 116 aa10.37□□□□□ -0.75
COMMD4-209ENST00000564068 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.37□□□□□ -0.75
COMMD4-209ENST00000564068 GUSBP1Q15486 140 aa10.37□□□□□ -0.75
COMMD4-209ENST00000564068 ZNF257Q9Y2Q1 563 aa10.37□□□□□ -0.75
COMMD4-209ENST00000564068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.37□□□□□ -0.751e-8■■■■□ 24.7
COMMD4-209ENST00000564068 MYO18BQ8IUG5 2567 aa10.37□□□□□ -0.75
COMMD4-209ENST00000564068 A0A1B0GWB2 263 aa10.37□□□□□ -0.75
COMMD4-209ENST00000564068 H7C2G1 150 aa10.37□□□□□ -0.75
COMMD4-209ENST00000564068 MLNRO43193 412 aa10.37□□□□□ -0.75
COMMD4-209ENST00000564068 RANBP2P49792 3224 aaKnown RBP10.36□□□□□ -0.75
COMMD4-209ENST00000564068 IGHV2OR16-5A0A0B4J2B6 119 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 A0A1B0GV72 72 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 MGPP08493 103 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 RBPJQ06330 500 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 SOX21Q9Y651 276 aaPredicted RBP10.36□□□□□ -0.75
COMMD4-209ENST00000564068 ITGB1BP1O14713 200 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 FRMD6-AS1P0C7T7 363 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 ZCCHC24Q8N2G6 241 aaKnown RBP10.36□□□□□ -0.75
COMMD4-209ENST00000564068 CD177Q8N6Q3 437 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 ZNF503-AS2A6NEH8 195 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 LYRM7Q5U5X0 104 aa10.36□□□□□ -0.75
COMMD4-209ENST00000564068 CIARTQ8N365 385 aaPredicted RBP10.36□□□□□ -0.75
COMMD4-209ENST00000564068 IGHV3OR16-13A0A075B7E8 117 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 IGHV3-74A0A0B4J1X5 117 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 K7EN84 100 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 BMI1P35226 326 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 ORMDL3Q8N138 153 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 OR4A5Q8NH83 315 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
COMMD4-209ENST00000564068 FMC1Q96HJ9 113 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 PROK2Q9HC23 129 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 IGF2RP11717 2491 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 COL4A4P53420 1690 aaPredicted RBP10.35□□□□□ -0.75
COMMD4-209ENST00000564068 SEC11AP67812 179 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 Q0VFX4 171 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 TRBV20OR9-2A0A075B6H5 130 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.35□□□□□ -0.75
COMMD4-209ENST00000564068 FOXC2Q99958 501 aa10.35□□□□□ -0.75
COMMD4-209ENST00000564068 MRPS18CQ9Y3D5 142 aaKnown RBP10.35□□□□□ -0.75
COMMD4-209ENST00000564068 TCRBV4S1A1TA0A5B7 111 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 PSG9Q00887 426 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 YPEL4Q96NS1 127 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 GTSF1LQ9H1H1 148 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 SPACA3Q8IXA5 215 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 ASCL2Q99929 193 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 FBXL15Q9H469 300 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 TRGV8A0A0C4DH27 118 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 ASCL5Q7RTU5 278 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 EXOC3-AS1Q8N2X6 119 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 TMEM186Q96B77 213 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 FAM90A9PA6NNJ1 464 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 GFRALQ6UXV0 394 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 ATP5L2Q7Z4Y8 100 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
COMMD4-209ENST00000564068 TTC9CQ8N5M4 171 aa10.33□□□□□ -0.76
COMMD4-209ENST00000564068 FGF23Q9GZV9 251 aaPredicted RBP10.33□□□□□ -0.76
COMMD4-209ENST00000564068 IGKV1-16P04430 117 aa10.33□□□□□ -0.76
COMMD4-209ENST00000564068 LGALS7P47929 136 aa10.33□□□□□ -0.76
COMMD4-209ENST00000564068 TEX45Q8NA69 505 aa10.33□□□□□ -0.76
COMMD4-209ENST00000564068 FOXA2Q9Y261 457 aaPredicted RBP10.33□□□□□ -0.76
COMMD4-209ENST00000564068 CD5LO43866 347 aa10.33□□□□□ -0.76
COMMD4-209ENST00000564068 GLRXP35754 106 aa10.33□□□□□ -0.76
COMMD4-209ENST00000564068 ZNF418Q8TF45 676 aaPredicted RBP10.33□□□□□ -0.76
COMMD4-209ENST00000564068 CEACAM3P40198 252 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 WDR86Q86TI4 376 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 FAM168AQ92567 244 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 MKI67P46013 3256 aaKnown RBP10.32□□□□□ -0.76
COMMD4-209ENST00000564068 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 OR11H12B2RN74 326 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 SAMD5Q5TGI4 173 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 ODF3L1Q8IXM7 274 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 OR11H1Q8NG94 326 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 OR11H2Q8NH07 326 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 ZNRD1Q9P1U0 126 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 CHD8Q9HCK8 2581 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 C16orf97H3BN30 126 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 C11orf1Q9H5F2 150 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 GP6Q9HCN6 339 aa10.32□□□□□ -0.76
COMMD4-209ENST00000564068 PPIFP30405 207 aaKnown RBP10.31□□□□□ -0.76
COMMD4-209ENST00000564068 ECSCRQ19T08 205 aa10.31□□□□□ -0.76
COMMD4-209ENST00000564068 RASL11AQ6T310 242 aa10.31□□□□□ -0.76
COMMD4-209ENST00000564068 SIGMAR1Q99720 223 aa10.31□□□□□ -0.76
COMMD4-209ENST00000564068 SRRM5B3KS81 715 aa10.31□□□□□ -0.76
COMMD4-209ENST00000564068 M0R3E3 92 aa10.31□□□□□ -0.76
COMMD4-209ENST00000564068 HBDP02042 147 aa10.31□□□□□ -0.76
COMMD4-209ENST00000564068 KIR3DS1Q14943 382 aa10.31□□□□□ -0.76
COMMD4-209ENST00000564068 CENPVQ7Z7K6 275 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms