RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
RPAP1-204ENST00000562303 A0A1B0GWJ7 208 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 ERCC8Q13216 396 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 TEX43Q6ZNM6 134 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 EXOC3-AS1Q8N2X6 119 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 CLDN16Q9Y5I7 305 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 LINC01549A6NIU2 74 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 CEACAM8P31997 349 aaPredicted RBP9.25□□□□□ -0.93
RPAP1-204ENST00000562303 C9orf139Q6ZV77 190 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 OCC1Q8TAD7 63 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 USMG5Q96IX5 58 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 CKAP5Q14008 2032 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 RNF222A6NCQ9 220 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 RNF223E7ERA6 249 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 KLF17Q5JT82 389 aaPredicted RBP9.25□□□□□ -0.93
RPAP1-204ENST00000562303 AHCTF1Q8WYP5 2266 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 ZNF138P52744 262 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 TMEM249Q2WGJ8 235 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 C1orf159Q96HA4 380 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 RNF5Q99942 180 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 ZNF319Q9P2F9 582 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 HEATR5BQ9P2D3 2071 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 C5orf64Q2M2E5 130 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 GGNQ86UU5 652 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 LSM4Q9Y4Z0 139 aaKnown RBP9.24□□□□□ -0.93
RPAP1-204ENST00000562303 NCR2O95944 276 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 PAQR4Q8N4S7 273 aaPredicted RBP9.24□□□□□ -0.93
RPAP1-204ENST00000562303 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 C1QL4Q86Z23 238 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 FNDC4Q9H6D8 234 aaPredicted RBP9.24□□□□□ -0.93
RPAP1-204ENST00000562303 STRCP1A6NGW2 1772 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 CD177Q8N6Q3 437 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 FLVCR1-AS1Q8TAF5 88 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 BPESC1Q9GZL8 116 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 WDR83OSQ9Y284 106 aa9.24□□□□□ -0.93
RPAP1-204ENST00000562303 CRYGSP22914 178 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 FAM223BA6NKX1 122 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 FAM223AQ8IWN6 122 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 LINC00518Q8N0U6 118 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 TMEM170AQ8WVE7 144 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 SPOCK3Q9BQ16 436 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 BUB1B-PAK6H3BSN5 160 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 SS18Q15532 418 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
RPAP1-204ENST00000562303 CHCHD1Q96BP2 118 aaKnown RBP9.23□□□□□ -0.93
RPAP1-204ENST00000562303 LINC00477Q96M19 166 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 RNF126Q9BV68 326 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 COL24A1Q17RW2 1714 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 ANKRD31Q8N7Z5 1873 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 CSRP3P50461 194 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 IFITM2Q01629 132 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 RHPN1-AS1Q9BWJ2 59 aa9.23□□□□□ -0.93
RPAP1-204ENST00000562303 COL8A2P25067 703 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 PLEKHB2Q96CS7 222 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 TCRAP04437 139 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 RPL32P62910 135 aaKnown RBP9.22□□□□□ -0.93
RPAP1-204ENST00000562303 ID3Q02535 119 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 FBLN5Q9UBX5 448 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 A0A0A6YYD4 124 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 LY6HO94772 140 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 SYNJ2BPP57105 145 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 SEC11AP67812 179 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 Q5PR19 223 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 SPATA31B1PQ5VZV4 182 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 GNB1LQ9BYB4 327 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 ANAPC10Q9UM13 185 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 ATAD5Q96QE3 1844 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 IGKV1-12A0A0C4DH73 117 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 A8MWV9 139 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 IGKV1D-12P01611 117 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
RPAP1-204ENST00000562303 TRAV9-2A0A087WT02 112 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 A0A087WV48 116 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 TRGV9Q99603 122 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 VSIRQ9H7M9 311 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 SCN2AQ99250 2005 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 PIKFYVEQ9Y2I7 2098 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 D6R8Y8 96 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 H0YJW9 148 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 VCYO14598 125 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 GAFA1Q96PS6 74 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 COL11A2P13942 1736 aaPredicted RBP9.21□□□□□ -0.93
RPAP1-204ENST00000562303 FAM186AA6NE01 2351 aa9.21□□□□□ -0.93
RPAP1-204ENST00000562303 IGKV1D-8A0A087WSZ0 117 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 HIST1H4AP62805 103 aaKnown RBP9.21□□□□□ -0.94
RPAP1-204ENST00000562303 IGFL4Q6B9Z1 124 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 Q8TAT8 98 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 ORAOV1Q8WV07 137 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 MEGF9Q9H1U4 602 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 SMPXQ9UHP9 88 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 CEP290O15078 2479 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 SIPA1L3O60292 1781 aaPredicted RBP9.21□□□□□ -0.94
RPAP1-204ENST00000562303 Q0VFX4 171 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms