RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ZNF709Q8N972 641 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 MAP1LC3BQ9GZQ8 125 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 SMDT1Q9H4I9 107 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 SLC39A9Q9NUM3 307 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 PEMTQ9UBM1 199 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 SOX21Q9Y651 276 aaPredicted RBP5.15□□□□□ -1.59
CAPN3-210ENST00000561817 ZANQ9Y493 2812 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 MYO9AB2RTY4 2548 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 ANK3Q12955 4377 aaKnown RBP5.14□□□□□ -1.59
CAPN3-210ENST00000561817 CELSR1Q9NYQ6 3014 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 NPIPB5A8MRT5 1133 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 K7EIM0 57 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 NDUFS6O75380 124 aaKnown RBP5.14□□□□□ -1.59
CAPN3-210ENST00000561817 HLA-DRB1P01911 266 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 HSPB1P04792 205 aaKnown RBP5.14□□□□□ -1.59
CAPN3-210ENST00000561817 FAM106CPP0CH98 169 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 BCL2P10415 239 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 GATA3P23771 443 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 OR10J1P30954 320 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 SUB1P53999 127 aaKnown RBP eCLIP5.14□□□□□ -1.59
CAPN3-210ENST00000561817 GNB1P62873 340 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 FXYD3Q14802 87 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 PEA15Q15121 130 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 KHDC3LQ587J8 217 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 SPATA31B1PQ5VZV4 182 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 FAM122CQ6P4D5 195 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 PRSS57Q6UWY2 283 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 C1QL4Q86Z23 238 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 TTC9CQ8N5M4 171 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 LINC01356Q8N9X3 169 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 SSMEM1Q8WWF3 244 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 NPIPB3Q92617 1050 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 DAZAP1Q96EP5 407 aaKnown RBP5.14□□□□□ -1.59
CAPN3-210ENST00000561817 SLC35E1Q96K37 410 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 SLC25A33Q9BSK2 321 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 ACTR3CQ9C0K3 210 aaPredicted RBP5.14□□□□□ -1.59
CAPN3-210ENST00000561817 SLC35B3Q9H1N7 401 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 TMPRSS5Q9H3S3 457 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 SRD5A3Q9H8P0 318 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 SLC25A22Q9H936 323 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 HIF1ANQ9NWT6 349 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 CCDC168Q8NDH2 2452 aa5.14□□□□□ -1.59
CAPN3-210ENST00000561817 ZFHX3Q15911 3703 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 IGLV11-55A0A075B6I3 123 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 IGHV3OR16-10A0A075B7F0 116 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 TRAV40A0A0B4J280 105 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 TCRBV4S1A1TA0A5B7 111 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF785A8K8V0 405 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 F8W036 122 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 CYB5BO43169 146 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 MT-CO2P00403 227 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 IGHV3-48P01763 117 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 APOC3P02656 99 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 FBP1P09467 338 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 OR5G3P0C626 314 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 STAG3L2P0CL84 134 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 APELAP0DMC3 54 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 IGHV4-31P0DP07 118 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 GATA2P23769 480 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-210ENST00000561817 BRS3P32247 399 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 CDC34P49427 236 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-210ENST00000561817 RND2P52198 227 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 CD81P60033 236 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 HES1Q14469 280 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 PLGLAQ15195 96 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 HAGHQ16775 308 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 PATE2Q6UY27 113 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 BRD3OSQ6XYD6 125 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 LCNL1Q6ZST4 164 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 CYP2G1PQ6ZSU1 146 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 Q71RC1 249 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-210ENST00000561817 C5orf56Q8N8D9 126 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 FAM110DQ8TAY7 271 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-210ENST00000561817 GATAD1Q8WUU5 269 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 TMEM37Q8WXS4 190 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 ARPC1AQ92747 370 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF503Q96F45 646 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 NARS2Q96I59 477 aaKnown RBP5.13□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF414Q96IQ9 312 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF479Q96JC4 524 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 TRGV9Q99603 122 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 HSPB9Q9BQS6 159 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 FAM103A1Q9BTL3 118 aaKnown RBP5.13□□□□□ -1.59
CAPN3-210ENST00000561817 PBDC1Q9BVG4 233 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 EIF5A2Q9GZV4 153 aaKnown RBP5.13□□□□□ -1.59
CAPN3-210ENST00000561817 KCNIP2Q9NS61 270 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF469Q96JG9 3925 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-210ENST00000561817 CSMD1Q96PZ7 3565 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 CSPG4Q6UVK1 2322 aa5.13□□□□□ -1.59
CAPN3-210ENST00000561817 A6NDX4 124 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 LINC01548A6NM66 108 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 NCBP2LA6PVI3 153 aaKnown RBP5.12□□□□□ -1.59
CAPN3-210ENST00000561817 J3QLI3 93 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 DNASE2O00115 360 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-210ENST00000561817 CORTO00230 105 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 HMGB3O15347 200 aaKnown RBP5.12□□□□□ -1.59
CAPN3-210ENST00000561817 CNIH1O95406 144 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 IGLC1P0CG04 106 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 CD99P14209 185 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 NPBWR1P48145 328 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms