RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 PSENENQ9NZ42 101 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ZNF581Q9P0T4 197 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ZNRD1Q9P1U0 126 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 CLN8Q9UBY8 286 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 TCF19Q9Y242 345 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 PRELID1Q9Y255 219 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 ZNF256Q9Y2P7 627 aaPredicted RBP2.46□□□□□ -2.02
SPG11-225ENST00000561391 CARHSP1Q9Y2V2 147 aaKnown RBP2.46□□□□□ -2.02
SPG11-225ENST00000561391 TIMM9Q9Y5J7 89 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 TSSC4Q9Y5U2 329 aaPredicted RBP2.46□□□□□ -2.02
SPG11-225ENST00000561391 KPTNQ9Y664 436 aa2.46□□□□□ -2.02
SPG11-225ENST00000561391 KIAA2026Q5HYC2 2103 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 DNAH11Q96DT5 4516 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 IGKV1D-17A0A075B6S4 117 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 IGKV1D-13A0A0B4J2D9 117 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 A0A1W2PPQ1 181 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 MSGN1A6NI15 193 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 ZSCAN5BA6NJL1 495 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 C17orf112F2Z3M2 114 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 C15orf65H3BRN8 121 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 CYB5BO43169 146 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 TNFSF12O43508 249 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 NDUFB3O43676 98 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 KRASP01116 189 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 IFNA1P01562 189 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 IGHV1-46P01743 117 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 AMBPP02760 352 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 HSPB1P04792 205 aaKnown RBP2.45□□□□□ -2.02
SPG11-225ENST00000561391 CD5P06127 495 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 IGKV1-13P0DP09 117 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 NQO2P16083 231 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 PAX6P26367 422 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 GLIPR1P48060 266 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 EDDM3BP56851 147 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 ERVS71-1P61550 626 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 RAB11AP62491 216 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 TNFRSF9Q07011 255 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 SSX2Q16385 188 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 RTL8BQ17RB0 113 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 KIAA1644Q3SXP7 199 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 MORN2Q502X0 79 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 LRRC10Q5BKY1 277 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 FAM74A1Q5RGS3 127 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 GFI1BQ5VTD9 330 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 PRAMEF6Q5VXH4 476 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 TEX36Q5VZQ5 186 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 FAM71F2Q6NXP2 309 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 BTNL8Q6UX41 500 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 Q6ZR03 302 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 ZNF826PQ6ZT77 177 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 LINC00336Q6ZUF6 198 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 PNKDQ8N490 385 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 CD177Q8N6Q3 437 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 BPIFCQ8NFQ6 507 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR10P1Q8NGE3 313 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR10G4Q8NGN3 311 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR5C1Q8NGR4 320 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR2G3Q8NGZ4 309 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR4A16Q8NH70 328 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR4S2Q8NH73 311 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR1L1Q8NH94 360 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 LHFPL5Q8TAF8 219 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 MRGPRDQ8TDS7 321 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 C17orf50Q8WW18 174 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 TCTEX1D2Q8WW35 142 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 TNFRSF14Q92956 283 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 COQ2Q96H96 371 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 DUX3Q96PT4 197 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 P2RX4Q99571 388 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 AGMATQ9BSE5 352 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 EIF5A2Q9GZV4 153 aaKnown RBP2.45□□□□□ -2.02
SPG11-225ENST00000561391 SLC35B3Q9H1N7 401 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR2D2Q9H210 308 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 C11orf1Q9H5F2 150 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 TUBA4BQ9H853 241 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 ZNF702PQ9H963 129 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 SIRT7Q9NRC8 400 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 SMCO4Q9NRQ5 59 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 C19orf12Q9NSK7 152 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 TMEM106BQ9NUM4 274 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 OR1A1Q9P1Q5 309 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 CACNG5Q9UF02 275 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 PRNDQ9UKY0 176 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 RCL1Q9Y2P8 373 aaKnown RBP2.45□□□□□ -2.02
SPG11-225ENST00000561391 LINC00312Q9Y6C7 94 aa2.45□□□□□ -2.02
SPG11-225ENST00000561391 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 IGSF23A1L1A6 192 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SMCO3A2RU48 225 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 FAM24AA6NFZ4 105 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 CEBPZOSA8MTT3 80 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 B4DEV8 164 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 FNDC10F2Z333 226 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 H7C2Y5 167 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 M0R1X1 148 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 ATP6V0E1O15342 81 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SIGLEC5O15389 551 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 CDK2AP2O75956 126 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 CST7O76096 145 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 IFNA17P01571 189 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms