RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 S100GP29377 79 aa13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 HRH1P35367 487 aa13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 FXYD7P58549 80 aa13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 DEFB1P60022 68 aa13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 SLC35G3Q8N808 338 aa13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 C15orf53Q8NAA6 179 aa13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 ABHD1Q96SE0 405 aa13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 YTHDF2Q9Y5A9 579 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 SCGB2A1O75556 95 aa13.9□□□□□ -0.18
RABGGTA-214ENST00000560163 HOXA1P49639 335 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-214ENST00000560163 UCP3P55916 312 aa13.9□□□□□ -0.18
RABGGTA-214ENST00000560163 YPEL3P61236 119 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-214ENST00000560163 USF2Q15853 346 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-214ENST00000560163 C1orf158Q8N1D5 194 aa13.9□□□□□ -0.18
RABGGTA-214ENST00000560163 SDHCQ99643 169 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-214ENST00000560163 CCDC32Q9BV29 185 aa13.9□□□□□ -0.18
RABGGTA-214ENST00000560163 GSTZ1O43708 216 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 IGKV3-20P01619 116 aa13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 DHODHQ02127 395 aa13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 SIGLEC15Q6ZMC9 328 aa13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 SPATA12Q7Z6I5 190 aa13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 Q8WTZ3 238 aa13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 SMIM4Q8WVI0 70 aa13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 SAV1Q9H4B6 383 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 SCPEP1Q9HB40 452 aa13.89□□□□□ -0.19
RABGGTA-214ENST00000560163 GABARAPH6UMI1 98 aa13.88□□□□□ -0.19
RABGGTA-214ENST00000560163 HLA-DMAP28067 261 aa13.88□□□□□ -0.19
RABGGTA-214ENST00000560163 PRSS54Q6PEW0 395 aa13.88□□□□□ -0.19
RABGGTA-214ENST00000560163 OR1S2Q8NGQ3 325 aa13.88□□□□□ -0.19
RABGGTA-214ENST00000560163 LOC102723971A0A1B0GUV8 181 aa13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 PRSS3P35030 304 aa13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 DAD1P61803 113 aa13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 SSBP1Q04837 148 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 PYDC2Q56P42 97 aa13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 SNX29P2Q8IUI4 249 aa13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 GPX8Q8TED1 209 aa13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 ATG101Q9BSB4 218 aa13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 SLC35B3Q9H1N7 401 aa13.87□□□□□ -0.19
RABGGTA-214ENST00000560163 IL4P05112 153 aa13.86□□□□□ -0.19
RABGGTA-214ENST00000560163 OR10J1P30954 320 aa13.86□□□□□ -0.19
RABGGTA-214ENST00000560163 TSPAN5P62079 268 aa13.86□□□□□ -0.19
RABGGTA-214ENST00000560163 FOXI2Q6ZQN5 318 aa13.86□□□□□ -0.19
RABGGTA-214ENST00000560163 TRIM63Q969Q1 353 aa13.86□□□□□ -0.19
RABGGTA-214ENST00000560163 HBE1P02100 147 aa13.85□□□□□ -0.19
RABGGTA-214ENST00000560163 RND2P52198 227 aa13.85□□□□□ -0.19
RABGGTA-214ENST00000560163 KRTAP10-2P60368 255 aa13.85□□□□□ -0.19
RABGGTA-214ENST00000560163 RND3P61587 244 aa13.85□□□□□ -0.19
RABGGTA-214ENST00000560163 GSG1LQ6UXU4 331 aa13.85□□□□□ -0.19
RABGGTA-214ENST00000560163 TP53RKQ96S44 253 aa13.85□□□□□ -0.19
RABGGTA-214ENST00000560163 GOLT1BQ9Y3E0 138 aa13.85□□□□□ -0.19
RABGGTA-214ENST00000560163 MYCBP2O75592 4640 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 A0A0G2JRQ6 117 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 UPK1BO75841 260 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 NXPH3O95157 252 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 IL7P13232 177 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 RRN3P1Q2M238 152 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 AARDQ4LEZ3 155 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 OR52I2Q8NH67 350 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 MTFP1Q9UDX5 166 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 FAT1Q14517 4588 aa13.84□□□□□ -0.19
RABGGTA-214ENST00000560163 RPS10-NUDT3A0A1W2PQS6 291 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 SOCS3O14543 225 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 SLC25A4P12235 298 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 AKR1C2P52895 323 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 PSG9Q00887 426 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 BAK1Q16611 211 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 OR4B1Q8NGF8 309 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 DEDD2Q8WXF8 326 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 ENY2Q9NPA8 101 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 LINC00588Q9Y4M8 146 aa13.83□□□□□ -0.2
RABGGTA-214ENST00000560163 TOMM40O96008 361 aa13.82□□□□□ -0.2
RABGGTA-214ENST00000560163 HTR2BP41595 481 aa13.82□□□□□ -0.2
RABGGTA-214ENST00000560163 PAX9P55771 341 aa13.82□□□□□ -0.2
RABGGTA-214ENST00000560163 C2orf83Q53S99 150 aa13.82□□□□□ -0.2
RABGGTA-214ENST00000560163 TMEM170AQ8WVE7 144 aa13.82□□□□□ -0.2
RABGGTA-214ENST00000560163 LINC00052Q96N35 136 aa13.82□□□□□ -0.2
RABGGTA-214ENST00000560163 KLK11Q9UBX7 282 aa13.82□□□□□ -0.2
RABGGTA-214ENST00000560163 RD3LP0DJH9 198 aa13.81□□□□□ -0.2
RABGGTA-214ENST00000560163 RCVRNP35243 200 aa13.81□□□□□ -0.2
RABGGTA-214ENST00000560163 PSMB3P49720 205 aa13.81□□□□□ -0.2
RABGGTA-214ENST00000560163 FAM78BQ5VT40 261 aa13.81□□□□□ -0.2
RABGGTA-214ENST00000560163 SPATA31B1PQ5VZV4 182 aa13.81□□□□□ -0.2
RABGGTA-214ENST00000560163 RNASEH2CQ8TDP1 164 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-214ENST00000560163 C7orf50Q9BRJ6 194 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-214ENST00000560163 EPM2AB3EWF7 344 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 ATG12O94817 140 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 PSG1P11464 419 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 PI3P19957 117 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 SPCS3P61009 180 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 IFITM3Q01628 133 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 TRIQKQ629K1 86 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 OR52E5Q8NH55 327 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 NPIPB3Q92617 1050 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 ZNF486Q96H40 463 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 KRTAP1-5Q9BYS1 174 aa13.8□□□□□ -0.2
RABGGTA-214ENST00000560163 A0A0J9YX75 114 aa13.79□□□□□ -0.2
RABGGTA-214ENST00000560163 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
RABGGTA-214ENST00000560163 ANKRD20A5PA0PJZ0 165 aa13.79□□□□□ -0.2
RABGGTA-214ENST00000560163 LYRM9A8MSI8 78 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms