RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-222	ENST00000560131	KIR3DP1	A8MWS1	328 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	C2CD4D	B7Z1M9	353 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	LMO7DN	F2Z398	122 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	PPIAL4D	F5H284	164 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	SYNGR1	O43759	233 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	SAP30	O75446	220 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131		P04436	131 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	SP1	P08047	785 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	CT45A6	P0DMU7	189 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	CT45A5	P0DMU8	189 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	CT45A10	P0DMU9	189 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	CT45A7	P0DMV0	189 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	PPIAL4F	P0DN26	164 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	HIST1H1E	P10412	219 aa	Known RBP	4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	FGF6	P10767	208 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	CCNO	P22674	350 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	HTR1D	P28221	377 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	G6PC	P35575	357 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	RPL30	P62888	115 aa	Known RBP	4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	SCGB2A2	Q13296	93 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	POU2AF1	Q16633	256 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	KIAA1644	Q3SXP7	199 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	CT45A1	Q5HYN5	189 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	MORN5	Q5VZ52	161 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	GFRAL	Q6UXV0	394 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	SHISA6	Q6ZSJ9	500 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	AAED1	Q7RTV5	226 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	MRPL21	Q7Z2W9	205 aa	Known RBP	4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	TMEM219	Q86XT9	240 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	BOD1L2	Q8IYS8	172 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	ATOH7	Q8N100	152 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	NUP35	Q8NFH5	326 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	OR10AG1	Q8NH19	301 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	CT45A3	Q8NHU0	189 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	GALM	Q96C23	342 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	RNASE7	Q9H1E1	156 aa	Known RBP	4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	NGB	Q9NPG2	151 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	IDI2-AS1	Q9NZ38	188 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	ZNF492	Q9P255	531 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	RARRES3	Q9UL19	164 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	TRAPPC2L	Q9UL33	140 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	POLDIP2	Q9Y2S7	368 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	PTPRB	P23467	1997 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	SPAG17	Q6Q759	2223 aa		4.19	□□□□□ -1.74
TPM1-222	ENST00000560131	PDE4DIP	Q5VU43	2346 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	IGHV1OR21-1	A0A087WYE8	117 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	IGHV1-24	A0A0C4DH33	117 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	LY6G6E	A0A0G2JKS1	128 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131		A0A0J9YW62	118 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131		A0A1B0GW15	77 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131		A0A1W2PPM0	123 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	ANKRD30BL	A7E2S9	258 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	C17orf98	A8MV24	154 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	SHISA9	B4DS77	424 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	DUX1	O43812	170 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	OR2H2	O95918	312 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	CA3	P07451	260 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	HLA-DRB4	P13762	266 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	B4GALT1	P15291	398 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	GABRG2	P18507	467 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	GATA2	P23769	480 aa	Predicted RBP	4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	DUSP3	P51452	185 aa	Predicted RBP	4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	MFAP2	P55001	183 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	FOXA3	P55318	350 aa	Predicted RBP	4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	RIPPLY3	P57055	190 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	MLF1	P58340	268 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	B3GALT5-AS1	P59052	145 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	HBB	P68871	147 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	SSBP2	P81877	361 aa	Predicted RBP	4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	C1orf61	Q13536	156 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	OR1C1	Q15619	314 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	GABRA6	Q16445	453 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	CEACAM16	Q2WEN9	425 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	GDF5OS	Q5U4N7	250 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	RNASEK	Q6P5S7	137 aa	Known RBP	4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	WDR82	Q6UXN9	313 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	SIGLEC15	Q6ZMC9	328 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	C16orf47	Q6ZP98	133 aa	Predicted RBP	4.18	□□□□□ -1.74
TPM1-222	ENST00000560131		Q6ZS92	163 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	IL17REL	Q6ZVW7	336 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	DOLPP1	Q86YN1	238 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	TMEM251	Q8N6I4	163 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	OR2T6	Q8NHC8	308 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	FAM222B	Q8WU58	562 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	BLNK	Q8WV28	456 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	IL1F10	Q8WWZ1	152 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	ZNF48	Q96MX3	618 aa	Predicted RBP	4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	RTL8A	Q9BWD3	113 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	DEFB126	Q9BYW3	111 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	UBTD1	Q9HAC8	227 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	HIGD1B	Q9P298	99 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	KLF12	Q9Y4X4	402 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	HLA-DRB4	X5D2U9	266 aa		4.18	□□□□□ -1.74
TPM1-222	ENST00000560131	SEC16A	O15027	2179 aa		4.17	□□□□□ -1.74
TPM1-222	ENST00000560131	NCKAP5	O14513	1909 aa		4.17	□□□□□ -1.74
TPM1-222	ENST00000560131	IGHV3-20	A0A0C4DH32	117 aa		4.17	□□□□□ -1.74
TPM1-222	ENST00000560131		A0A0G2JLM5	398 aa		4.17	□□□□□ -1.74
TPM1-222	ENST00000560131	TRBV6-1	A0A0K0K1D8	114 aa		4.17	□□□□□ -1.74
TPM1-222	ENST00000560131		A0A1W2PR80	420 aa		4.17	□□□□□ -1.74
TPM1-222	ENST00000560131	SRRM4	A7MD48	611 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms