RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 YPEL2Q96QA6 119 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 PAPPA2Q9BXP8 1791 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 TRAV12-1A0A0B4J245 112 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 PEBP1P30086 187 aaKnown RBP11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 CD200R1LQ6Q8B3 271 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 C12orf77C9JDV5 145 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 SYS1-DBNDD2H3BUS1 97 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 Q5BKY6 102 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 LINC00477Q96M19 166 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 PRR19A6NJB7 356 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 TIMP3P35625 211 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 SAP30O75446 220 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 RTBDNQ9BSG5 229 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 AMELYQ99218 206 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 TAL2Q16559 108 aa11.52□□□□□ -0.56
CSPG4P12-202ENST00000559989 TEX38Q6PEX7 206 aa11.52□□□□□ -0.56
CSPG4P12-202ENST00000559989 LINC01560Q8TB33 94 aa11.52□□□□□ -0.56
CSPG4P12-202ENST00000559989 DOCK8Q8NF50 2099 aa11.52□□□□□ -0.56
CSPG4P12-202ENST00000559989 PYYP10082 97 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 FOXS1O43638 330 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 AMBPP02760 352 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 TMEM158Q8WZ71 300 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 SAA2-SAA4A0A096LPE2 208 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 TRBV5-3A0A0A0MS03 114 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 IGHG2P01859 326 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 SAA2P0DJI9 122 aaPredicted RBP11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 FAM166AQ6J272 317 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 ZNF501Q96CX3 271 aaPredicted RBP11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 TRBV7-1A0A0A6YYK4 115 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 WNT2P09544 360 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 GAS1P54826 345 aa11.52□□□□□ -0.57
CSPG4P12-202ENST00000559989 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 RTTNQ86VV8 2226 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 CRLF1O75462 422 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 CELA2AP08217 269 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 ZNF138P52744 262 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 STPG1Q5TH74 334 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 CENPVL1A0A0U1RR11 272 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 RPP25Q9BUL9 199 aaKnown RBP11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 RPL35AP18077 110 aaKnown RBP11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 GZMMP51124 257 aa11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 REPIN1Q9BWE0 567 aaKnown RBP11.51□□□□□ -0.57
CSPG4P12-202ENST00000559989 TRAV13-2A0A0B4J235 113 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 IGFBP3P17936 291 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 PRB3Q04118 309 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 DEFB121Q5J5C9 76 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 WDR81Q562E7 1941 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 LYZL1Q6UWQ5 148 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 SCRT2Q9NQ03 307 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 MRPL27Q9P0M9 148 aaKnown RBP11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 NCKAP5O14513 1909 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 C22orf46C9J442 243 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 IFI6P09912 130 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 MPV17L2Q567V2 206 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 CGB3P0DN86 165 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 IGFBP6P24592 240 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 BCORQ6W2J9 1755 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 CACNA1DQ01668 2161 aa11.5□□□□□ -0.57
CSPG4P12-202ENST00000559989 MYO7AQ13402 2215 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 TRPT1Q86TN4 253 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 SPSB2Q99619 263 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 KLRD1Q13241 179 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 TMEM52Q8NDY8 209 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 LOC285556D6RIA3 1793 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 SH2D1AO60880 128 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 IGHV3-53P01767 116 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 MBNL3Q9NUK0 354 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 A0A0G2JK05 382 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 CTSBP07858 339 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 CEACAM1P13688 526 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 DEPPQ9NTK1 212 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 TSSC4Q9Y5U2 329 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 FAM181AQ8N9Y4 354 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 FBLIM1Q8WUP2 373 aa11.49□□□□□ -0.57
CSPG4P12-202ENST00000559989 MYLKQ15746 1914 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 SRRM4A7MD48 611 aaKnown RBP11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 C9orf118A6NHY6 69 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 TMEM133Q9H2Q1 129 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 RMI2Q96E14 147 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 SHISA9B4DS77 424 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 SPSB3Q6PJ21 355 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 FREM3P0C091 2139 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 CD55P08174 381 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 SLC25A28Q96A46 364 aa11.48□□□□□ -0.57
CSPG4P12-202ENST00000559989 LCNL1Q6ZST4 164 aa11.47□□□□□ -0.57
CSPG4P12-202ENST00000559989 CGB7P0DN87 165 aa11.47□□□□□ -0.57
CSPG4P12-202ENST00000559989 TRBV24-1A0A075B6N3 115 aa11.47□□□□□ -0.57
CSPG4P12-202ENST00000559989 MORN2Q502X0 79 aa11.47□□□□□ -0.57
CSPG4P12-202ENST00000559989 ZNF319Q9P2F9 582 aa11.47□□□□□ -0.57
CSPG4P12-202ENST00000559989 ZNF497Q6ZNH5 498 aa11.47□□□□□ -0.57
CSPG4P12-202ENST00000559989 PKIGQ9Y2B9 76 aa11.47□□□□□ -0.57
CSPG4P12-202ENST00000559989 RAMP3O60896 148 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms