RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 HSD17B13Q7Z5P4 300 aaPredicted RBP7.31□□□□□ -1.24
SPG11-214ENST00000558989 RBPMSQ93062 196 aaKnown RBP7.31□□□□□ -1.24
SPG11-214ENST00000558989 GPR146Q96CH1 333 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 SRRQ9GZT4 340 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 ENY2Q9NPA8 101 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 C21orf62Q9NYP8 219 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 CACNG5Q9UF02 275 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 SMAD5-AS1Q9Y6J3 95 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 DNAH9Q9NYC9 4486 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 C2orf70A6NJV1 201 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 K7EIM0 57 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 TGOLN2O43493 480 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 CDS2O95674 445 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 P0C879 139 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 FOLR2P14207 255 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 SNCAP37840 140 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 CCR6P51684 374 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 RAB14P61106 215 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 DHODHQ02127 395 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 GAGE2BQ13066 116 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 FAM106AQ4KMX7 169 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 GAGE2EQ4V326 116 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 TRIQKQ629K1 86 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 GAGE2AQ6NT46 116 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 KCNIP4Q6PIL6 250 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 SCGB3A2Q96PL1 93 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 GAGE2DQ9UEU5 116 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 KCNIP3Q9Y2W7 256 aa7.31□□□□□ -1.24
SPG11-214ENST00000558989 MT-CO2P00403 227 aa7.3□□□□□ -1.24
SPG11-214ENST00000558989 SUPT4H1P63272 117 aaKnown RBP7.3□□□□□ -1.24
SPG11-214ENST00000558989 TMEM187Q14656 261 aa7.3□□□□□ -1.24
SPG11-214ENST00000558989 RNF151Q2KHN1 245 aa7.3□□□□□ -1.24
SPG11-214ENST00000558989 OR1P1Q8NH06 330 aa7.3□□□□□ -1.24
SPG11-214ENST00000558989 VN1R17PQ8TDU5 208 aa7.3□□□□□ -1.24
SPG11-214ENST00000558989 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
SPG11-214ENST00000558989 IGHV3-49A0A0A0MS15 119 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 CEBPZOSA8MTT3 80 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 YIF1AO95070 293 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 UBE2V1Q13404 147 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 MLANAQ16655 118 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 LYZL2Q7Z4W2 148 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 GPHB5Q86YW7 130 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 PARD6GQ9BYG4 376 aaPredicted RBP7.29□□□□□ -1.24
SPG11-214ENST00000558989 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.29□□□□□ -1.24
SPG11-214ENST00000558989 FLVCR2Q9UPI3 526 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 TMEM213A2RRL7 107 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 FRMD6-AS1P0C7T7 363 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 CBLN1P23435 193 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 KLK9Q2XQG4 91 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 LCN12Q6JVE5 192 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 SDHCQ99643 169 aaPredicted RBP7.29□□□□□ -1.24
SPG11-214ENST00000558989 WFDC10AQ9H1F0 79 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 HIPK2Q9H2X6 1198 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 GSN-AS1Q9NRJ2 163 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 MLXQ9UH92 298 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 KLK9Q9UKQ9 250 aa7.29□□□□□ -1.24
SPG11-214ENST00000558989 COL7A1Q02388 2944 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 IGHV3OR16-13A0A075B7E8 117 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 IGHV3-74A0A0B4J1X5 117 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 I3L2K1 104 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 LGALS9O00182 355 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 GNG7O60262 68 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 CD7P09564 240 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 RNASE2P10153 161 aaKnown RBP7.28□□□□□ -1.24
SPG11-214ENST00000558989 ANXA3P12429 323 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 OPRK1P41145 380 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 ELLP55199 621 aaPredicted RBP7.28□□□□□ -1.24
SPG11-214ENST00000558989 CD81P60033 236 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 DEFB114Q30KQ6 69 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 GGNBP1Q5YKI7 109 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 GTSCR1Q86UQ5 136 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 SBSPONQ8IVN8 264 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 OR1L6Q8NGR2 347 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 MRPL53Q96EL3 112 aaKnown RBP7.28□□□□□ -1.24
SPG11-214ENST00000558989 NDUFAF3Q9BU61 184 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 BATF3Q9NR55 127 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 TMEM56-RWDD3S4R434 201 aa7.28□□□□□ -1.24
SPG11-214ENST00000558989 SULT1A3P0DMM9 295 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 SULT1A4P0DMN0 295 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 IGHV4-30-4P0DP06 118 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 PPP1R1AQ13522 171 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 TMEM61Q8N0U2 210 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 LGI3Q8N145 548 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 CENPSQ8N2Z9 138 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 OR1S1Q8NH92 325 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 GALNT14Q96FL9 552 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 IGKV3-7A0A075B6H7 116 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 NUPL2O15504 423 aaKnown RBP7.27□□□□□ -1.25
SPG11-214ENST00000558989 CTSGP08311 255 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 IL7P13232 177 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 SUB1P53999 127 aaKnown RBP eCLIP7.27□□□□□ -1.25
SPG11-214ENST00000558989 SPCS3P61009 180 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 TMEM128Q5BJH2 165 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 ZNF114Q8NC26 417 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 TMEM190Q8WZ59 177 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 TUBA4BQ9H853 241 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 MRPL36Q9P0J6 103 aaKnown RBP7.27□□□□□ -1.25
SPG11-214ENST00000558989 UFC1Q9Y3C8 167 aa7.27□□□□□ -1.25
SPG11-214ENST00000558989 A8MWP6 167 aa7.26□□□□□ -1.25
SPG11-214ENST00000558989 SMCO1Q147U7 214 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms