RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 OBSL1O75147 1896 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 TRAV7A0A075B6U4 112 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 TRGV5A0A0B4J1U4 118 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 A0A1B0GW64 132 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 C9JAW5 83 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 C3orf84H3BNL1 204 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 C1QCP02747 245 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 UCHL1P09936 223 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 LINC00315P59091 139 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 SPCS2Q15005 226 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 OR5A1Q8NGJ0 315 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 HIGD1AQ9Y241 93 aa2.92□□□□□ -1.94
VRK1-203ENST00000555067 N4BP2Q86UW6 1770 aaPredicted RBP2.92□□□□□ -1.94
VRK1-203ENST00000555067 CACNA1DQ01668 2161 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 ERCC6Q03468 1493 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 EML6Q6ZMW3 1958 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 KIF26AQ9ULI4 1882 aaPredicted RBP2.91□□□□□ -1.94
VRK1-203ENST00000555067 J3QQQ9 107 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 SYNGR2O43760 224 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 NAPSAO96009 420 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 MPC1LP0DKB6 136 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 TMBIM6P55061 237 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 ARPP19P56211 112 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 MORN2Q502X0 79 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 C22orf39Q6P5X5 142 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 YPEL2Q96QA6 119 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 VPS25Q9BRG1 176 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 TIMM9Q9Y5J7 89 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 HSPE1-MOB4S4R3N1 261 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 SLX4Q8IY92 1834 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 SCN9AQ15858 1988 aa2.91□□□□□ -1.94
VRK1-203ENST00000555067 CEP164Q9UPV0 1460 aa2.9□□□□□ -1.94
VRK1-203ENST00000555067 MED23Q9ULK4 1368 aa2.9□□□□□ -1.94
VRK1-203ENST00000555067 MEIS3P1A6NDR6 274 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 K7ERJ3 54 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 LYZL6O75951 148 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 CST7O76096 145 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 OR2H2O95918 312 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 VMA21Q3ZAQ7 101 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 KHDC3LQ587J8 217 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 FAM27BQ5VT28 67 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 Q5XG85 94 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 SOSTDC1Q6X4U4 206 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 Q6ZS52 159 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 ADAT1Q9BUB4 502 aaKnown RBP2.9□□□□□ -1.95
VRK1-203ENST00000555067 HIGD2AQ9BW72 106 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 ZNF471Q9BX82 626 aaPredicted RBP2.9□□□□□ -1.95
VRK1-203ENST00000555067 MRPL16Q9NX20 251 aaKnown RBP2.9□□□□□ -1.95
VRK1-203ENST00000555067 EPDR1Q9UM22 224 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 ANKRD31Q8N7Z5 1873 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 NCAPD3P42695 1498 aa2.9□□□□□ -1.95
VRK1-203ENST00000555067 IGLV2-18A0A075B6J9 118 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 TRAV5A0A0B4J249 113 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 A0A0J9YX75 114 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 LOC107984640A0A0U1RRK4 108 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 C5orf58C9J3I9 102 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 H7C2G1 150 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 PSCAO43653 123 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 NDUFB3O43676 98 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 SCTP09683 121 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 HRES1P13985 223 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 SDC2P34741 201 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 HIST1H1AQ02539 215 aaPredicted RBP2.89□□□□□ -1.95
VRK1-203ENST00000555067 LYZL1Q6UWQ5 148 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 SLC35E3Q7Z769 313 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 TCTE3Q8IZS6 198 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 TMEM106AQ96A25 262 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 TRAPPC8Q9Y2L5 1435 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 RIMBP3CA6NJZ7 1639 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 RIMBP3BA6NNM3 1639 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 RIMBP3Q9UFD9 1639 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 CCDC171Q6TFL3 1326 aa2.89□□□□□ -1.95
VRK1-203ENST00000555067 MALRD1Q5VYJ5 2156 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 IGKV2-28A0A075B6P5 120 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 TRGV10A0A0A0MS01 117 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 K7EP13 123 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 DPM2O94777 84 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 IGKV2D-28P01615 120 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 SHBGP04278 402 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 P0DMU3 169 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 FAM231AP0DMU4 169 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 FAM231CP0DMU5 169 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 FABP2P12104 132 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 NFYAP23511 347 aaPredicted RBP2.88□□□□□ -1.95
VRK1-203ENST00000555067 HBBP68871 147 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 RPL13AP3Q6NVV1 102 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 PDZD9Q8IXQ8 264 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 TSTD1Q8NFU3 115 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 CGREF1Q99674 301 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 PRADC1Q9BSG0 188 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 NPCDR1Q9BY65 106 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 SMIM3Q9BZL3 60 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 HHLA3Q9XRX5 114 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 U3KQ87 197 aa2.88□□□□□ -1.95
VRK1-203ENST00000555067 ARHGEF28Q8N1W1 1705 aaKnown RBP2.88□□□□□ -1.95
VRK1-203ENST00000555067 SEC16AO15027 2179 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 TRBV10-2A0A0K0K1G8 114 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 A0A1B0GV90 55 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 A0A1B0GVG6 124 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms