RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TP53RKQ96S44 253 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 ADAT1Q9BUB4 502 aaKnown RBP2.63□□□□□ -1.99
SCFD1-211ENST00000554437 OR5AC2Q9NZP5 309 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 ERG28Q9UKR5 140 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 HEY1Q9Y5J3 304 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 GPR179Q6PRD1 2367 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 OVOS2A0A0J9YW53 1432 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 OVOS2Q6IE36 1432 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 IGHV3OR16-8A0A075B7F1 116 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 IGHV1-58A0A0C4DH39 117 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 TRBV7-6A0A0J9YX20 115 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 LOC107984640A0A0U1RRK4 108 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 MEIS3P1A6NDR6 274 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 ATP6V1G2-DDX39BF2Z307 99 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 H3BPC8 53 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 K7ERU9 68 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 SLC22A1O15245 554 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 PGLYRP1O75594 196 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-211ENST00000554437 PAEPP09466 180 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 GZMBP10144 247 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 EIF2B2P49770 351 aaKnown RBP2.62□□□□□ -1.99
SCFD1-211ENST00000554437 FOXA1P55317 472 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 SELENOWP63302 87 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 HBBP68871 147 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 NEDD8Q15843 81 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 Q5XG85 94 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 ZNF660Q6AZW8 331 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-211ENST00000554437 C4orf22Q6V702 233 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 LINC00305Q7Z4B0 112 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 SIGLECL1Q8N7X8 197 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 FGF13Q92913 245 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 ARL11Q969Q4 196 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 IMMP2LQ96T52 175 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 LPAR5Q9H1C0 372 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 KIF13BQ9NQT8 1826 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 A2MP01023 1474 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 NLRC5Q86WI3 1866 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 ANKRD12Q6UB98 2062 aa2.62□□□□□ -1.99
SCFD1-211ENST00000554437 COL18A1P39060 1754 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 PTPRGP23470 1445 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 TRAPPC8Q9Y2L5 1435 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 DOCK8Q8NF50 2099 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 TMEM235A6NFC5 223 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 H3BT86 120 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 IFNGP01579 166 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 MT-ND4LP03901 98 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 MSMBP08118 114 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 KDELR1P24390 212 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 RPL28P46779 137 aaKnown RBP2.61□□□□□ -1.99
SCFD1-211ENST00000554437 ARPP19P56211 112 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 TMEM244Q5VVB8 128 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 PHF5AQ7RTV0 110 aaKnown RBP2.61□□□□□ -1.99
SCFD1-211ENST00000554437 GGACTQ9BVM4 153 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 ZNF471Q9BX82 626 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-211ENST00000554437 NPCDR1Q9BY65 106 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 CBLN4Q9NTU7 201 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 TXNL4BQ9NX01 149 aaKnown RBP2.61□□□□□ -1.99
SCFD1-211ENST00000554437 EPDR1Q9UM22 224 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 BAIAP2Q9UQB8 552 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 SVILO95425 2214 aa2.61□□□□□ -1.99
SCFD1-211ENST00000554437 SMG6Q86US8 1419 aaKnown RBP2.6□□□□□ -1.99
SCFD1-211ENST00000554437 ADGBQ8N7X0 1667 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 DOCK6Q96HP0 2047 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 TOPBP1Q92547 1522 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 TRAV13-1A0A0B4J241 112 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 FAM92AA1XBS5 289 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 FAM25AB3EWG3 89 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 FAM25CB3EWG5 89 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 FAM25GB3EWG6 89 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 K7EM74 188 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 TP53I11O14683 189 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 NDUFB3O43676 98 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 HIST1H2BKO60814 126 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 TCL1BO95988 128 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 HIST1H2BJP06899 126 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 RNASE2P10153 161 aaKnown RBP2.6□□□□□ -1.99
SCFD1-211ENST00000554437 NFYAP23511 347 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-211ENST00000554437 COL8A2P25067 703 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 RPL35P42766 123 aaKnown RBP2.6□□□□□ -1.99
SCFD1-211ENST00000554437 RPS25P62851 125 aaKnown RBP2.6□□□□□ -1.99
SCFD1-211ENST00000554437 MYL5Q02045 173 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 GLYATL3Q5SZD4 288 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 AMMECR1LQ6DCA0 310 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 EIF5AL1Q6IS14 154 aaKnown RBP2.6□□□□□ -1.99
SCFD1-211ENST00000554437 IDO2Q6ZQW0 420 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 C1orf64Q8NEQ6 169 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 OR4S1Q8NGB4 309 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 OR4C6Q8NH72 309 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 PFN4Q8NHR9 129 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 TMEM106AQ96A25 262 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 C12orf57Q99622 126 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 LINC00470Q9BZP3 86 aa2.6□□□□□ -1.99
SCFD1-211ENST00000554437 MRPL16Q9NX20 251 aaKnown RBP2.6□□□□□ -1.99
SCFD1-211ENST00000554437 COL27A1Q8IZC6 1860 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-211ENST00000554437 MED1Q15648 1581 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-211ENST00000554437 A0A1B0GU33 70 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 GGTLC3B5MD39 225 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 H3BMG7 143 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 C3orf84H3BNL1 204 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms