RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RNF138Q8WVD3 245 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 RITA1Q96K30 269 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 KLF13Q9Y2Y9 288 aaPredicted RBP7.72□□□□□ -1.17
SIX4-202ENST00000554079 LAMA3Q16787 3333 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 HEATR1Q9H583 2144 aaKnown RBP7.71□□□□□ -1.17
SIX4-202ENST00000554079 TRAV25A0A0B4J276 109 aa7.71□□□□□ -1.17
SIX4-202ENST00000554079 SRRM4A7MD48 611 aaKnown RBP7.71□□□□□ -1.17
SIX4-202ENST00000554079 MKXQ8IYA7 352 aa7.71□□□□□ -1.17
SIX4-202ENST00000554079 ZNF808Q8N4W9 903 aaPredicted RBP7.71□□□□□ -1.17
SIX4-202ENST00000554079 PPP1R35Q8TAP8 253 aa7.71□□□□□ -1.17
SIX4-202ENST00000554079 RPEQ96AT9 228 aa7.71□□□□□ -1.17
SIX4-202ENST00000554079 ZNF414Q96IQ9 312 aa7.71□□□□□ -1.17
SIX4-202ENST00000554079 HSD17B10Q99714 261 aaKnown RBP7.71□□□□□ -1.17
SIX4-202ENST00000554079 TTTY13Q9BZ97 58 aa7.71□□□□□ -1.17
SIX4-202ENST00000554079 SPANXA1Q9NS26 97 aa7.71□□□□□ -1.17
SIX4-202ENST00000554079 LAMA2P24043 3122 aaKnown RBP7.71□□□□□ -1.17
SIX4-202ENST00000554079 DYSFO75923 2080 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 TRBV20-1A0A075B6N2 111 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 HAX1O00165 279 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 DUTP33316 252 aaKnown RBP7.71□□□□□ -1.18
SIX4-202ENST00000554079 RUNX3Q13761 415 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 PEAR1Q5VY43 1037 aaPredicted RBP7.71□□□□□ -1.18
SIX4-202ENST00000554079 LINC00322Q6ZN03 302 aaPredicted RBP7.71□□□□□ -1.18
SIX4-202ENST00000554079 ZNF497Q6ZNH5 498 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 RBPMS2Q6ZRY4 209 aaKnown RBP7.71□□□□□ -1.18
SIX4-202ENST00000554079 ZNF329Q86UD4 541 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 GATD1Q8NB37 220 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.71□□□□□ -1.18
SIX4-202ENST00000554079 COQ2Q96H96 371 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 ZNF488Q96MN9 340 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 GFRA4Q9GZZ7 299 aa7.71□□□□□ -1.18
SIX4-202ENST00000554079 AMMECR1Q9Y4X0 333 aaPredicted RBP7.71□□□□□ -1.18
SIX4-202ENST00000554079 C19orf71A6NCJ1 209 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 H0Y8X5 98 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 ZNF688P0C7X2 276 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 ZNF32P17041 273 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 HHEXQ03014 270 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 SRYQ05066 204 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 TAL2Q16559 108 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 Q6Q795 121 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 FAM159AQ6UWV7 190 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 TEN1Q86WV5 123 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 SLC37A2Q8TED4 501 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 SLC25A33Q9BSK2 321 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 MAP1LC3AQ9H492 121 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 ZNF492Q9P255 531 aa7.7□□□□□ -1.18
SIX4-202ENST00000554079 LINC01548A6NM66 108 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 LINC00473A8K010 186 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 PATE4P0C8F1 98 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 HLA-DRB4P13762 266 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 MORN3Q6PF18 240 aaPredicted RBP7.69□□□□□ -1.18
SIX4-202ENST00000554079 FAM169BQ8N8A8 192 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 OR5AN1Q8NGI8 311 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 RND1Q92730 232 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 FAM167A-AS1Q96KT0 104 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 MLST8Q9BVC4 326 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 RAB9BQ9NP90 201 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 DKK2Q9UBU2 259 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 HLA-DRB4X5D2U9 266 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 TRIOBPQ9H2D6 2365 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 IGLV3-32A0A0A0MS00 114 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 WI2-2373I1.2A0A1W2PRP0 233 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 NDUFS7O75251 213 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 SCGB2A1O75556 95 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 C8orf88P0DMB2 117 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 IFITM1P13164 125 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 MYOD1P15172 320 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 COL9A1P20849 921 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 PAX8Q06710 450 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 ALKBH6Q3KRA9 238 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 FAM53AQ6NSI3 398 aaPredicted RBP7.69□□□□□ -1.18
SIX4-202ENST00000554079 ITLN1Q8WWA0 313 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 DLX4Q92988 240 aaPredicted RBP7.69□□□□□ -1.18
SIX4-202ENST00000554079 SLC25A2Q9BXI2 301 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 CABIN1Q9Y6J0 2220 aa7.69□□□□□ -1.18
SIX4-202ENST00000554079 A4D1N5 150 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 SHISA9B4DS77 424 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 IFI27P40305 119 aaPredicted RBP7.68□□□□□ -1.18
SIX4-202ENST00000554079 LINC00205P59089 165 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 GAGE2BQ13066 116 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 PRR30Q53SZ7 412 aaPredicted RBP7.68□□□□□ -1.18
SIX4-202ENST00000554079 PSMG4Q5JS54 123 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 DEFB123Q8N688 67 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 PRSS3P2Q8NHM4 247 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 RASL10AQ92737 203 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 IFI27L1Q96BM0 104 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 TMEM126AQ9H061 195 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 MDFICQ9P1T7 246 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 SZT2Q5T011 3432 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 TRGV8A0A0C4DH27 118 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 TMEM262E9PQX1 116 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 SP1P08047 785 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 UBE2L3P68036 154 aaKnown RBP7.68□□□□□ -1.18
SIX4-202ENST00000554079 MEIG1Q5JSS6 88 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 TMEM78Q5T7P6 136 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 MORN5Q5VZ52 161 aa7.68□□□□□ -1.18
SIX4-202ENST00000554079 SBSPONQ8IVN8 264 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms