RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	RSPO3	Q9BXY4	272 aa	Predicted RBP	5.1	□□□□□ -1.59
PFKM-231	ENST00000553055	MS4A8	Q9BY19	250 aa		5.1	□□□□□ -1.59
PFKM-231	ENST00000553055	ACAN	P16112	2415 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055		A0A1W2PRE2	83 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055		H0YJW9	148 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	SRSF10	O75494	262 aa	Known RBP	5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	IGLV3-27	P01718	113 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	TSPAN19	P0C672	248 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	RPS3	P23396	243 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	CDK2	P24941	298 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	CNTFR	P26992	372 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	S100A2	P29034	98 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	RRAS2	P62070	204 aa	Predicted RBP	5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	RNASE13	Q5GAN3	156 aa	Known RBP	5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	IBA57	Q5T440	356 aa	Known RBP	5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	OR13C4	Q8NGS5	318 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	RNASE11	Q8TAA1	199 aa	Known RBP	5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	TMEM158	Q8WZ71	300 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	SLC25A46	Q96AG3	418 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	TSPAN32	Q96QS1	320 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	NMNAT3	Q96T66	252 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	NDUFB11	Q9NX14	153 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	AK3	Q9UIJ7	227 aa		5.09	□□□□□ -1.59
PFKM-231	ENST00000553055	IGLV3-10	A0A075B6K4	115 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055		A0A1W2PQ67	120 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	C5orf63	A6NC05	138 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	SRRM5	B3KS81	715 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	CCL22	O00626	93 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	GSTZ1	O43708	216 aa	Predicted RBP	5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	TRAF3IP2	O43734	574 aa	Predicted RBP	5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	IFNA7	P01567	189 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	APOA2	P02652	100 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	LGALS1	P09382	135 aa	Known RBP	5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	GPX2	P18283	190 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	GLRX	P35754	106 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	CRIP2	P52943	208 aa	Predicted RBP	5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	MAX	P61244	160 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	HOXC5	Q00444	222 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	C12orf74	Q32Q52	190 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	PYDC2	Q56P42	97 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055		Q5BKY6	102 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	CLLU1	Q5K131	121 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	OSR2	Q8N2R0	312 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	C9orf62	Q8N4C0	152 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	MALSU1	Q96EH3	234 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	NRTN	Q99748	197 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	DOHH	Q9BU89	302 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	EFCAB11	Q9BUY7	163 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	LSM2	Q9Y333	95 aa	Known RBP	5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	ZNF106	Q9H2Y7	1883 aa	Known RBP	5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	ESPL1	Q14674	2120 aa		5.08	□□□□□ -1.6
PFKM-231	ENST00000553055	YLPM1	P49750	1951 aa	Known RBP	5.07	□□□□□ -1.6
PFKM-231	ENST00000553055		A0A1B0GVX0	72 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	NKX2-6	A6NCS4	301 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055		K7EM74	188 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	LYRM1	O43325	122 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	NDUFA2	O43678	99 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	IGKV1-39	P01597	117 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	OPN1SW	P03999	348 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	IGKV1D-39	P04432	117 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	OR56A5	P0C7T3	313 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	CPM	P14384	443 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	LINC00313	P59037	77 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	RPS20	P60866	119 aa	Known RBP	5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	SNRPG	P62308	76 aa	Known RBP	5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	HNRNPA0	Q13151	305 aa	Known RBP	5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	MMD	Q15546	238 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	GRK1	Q15835	563 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	C15orf32	Q32M92	178 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	C18orf65	Q6ZTR6	163 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	BAP18	Q8IXM2	172 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	KRTCAP2	Q8N6L1	136 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	LINC01006	Q8NI28	216 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	KLK6	Q92876	244 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	RMI2	Q96E14	147 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	GNPNAT1	Q96EK6	184 aa	Predicted RBP	5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	CCL13	Q99616	98 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	KRTAP9-2	Q9BYQ4	174 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	ALX4	Q9H161	411 aa	Predicted RBP	5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	GPR84	Q9NQS5	396 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	ZNF492	Q9P255	531 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	RPS6KB2	Q9UBS0	482 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055		U3KQA8	63 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	RTTN	Q86VV8	2226 aa		5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.07	□□□□□ -1.6
PFKM-231	ENST00000553055	IGKV1-6	A0A0C4DH72	117 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055		I3L521	148 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	FSTL3	O95633	263 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	GZMH	P20718	246 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	SELENOW	P63302	87 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	SCGB2B2	Q4G0G5	96 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	C9orf129	Q5T035	196 aa	Known RBP	5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	SLC22A24	Q8N4F4	322 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	OR5J2	Q8NH18	312 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	OR4C6	Q8NH72	309 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	TYMSOS	Q8TAI1	123 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	ZNF431	Q8TF32	576 aa	Predicted RBP	5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	MBD3L1	Q8WWY6	194 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	ACOT12	Q8WYK0	555 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms