RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TMEM30BQ3MIR4 351 aa10.15□□□□□ -0.78
SCAF11-209ENST00000547018 FBXL19-AS1Q494R0 122 aa10.15□□□□□ -0.78
SCAF11-209ENST00000547018 FAM120AOSQ5T036 256 aa10.15□□□□□ -0.78
SCAF11-209ENST00000547018 TPTE2P1Q5T6R2 138 aa10.15□□□□□ -0.78
SCAF11-209ENST00000547018 IGHV3-49A0A0A0MS15 119 aa10.15□□□□□ -0.79
SCAF11-209ENST00000547018 PGPA6NDG6 321 aa10.15□□□□□ -0.79
SCAF11-209ENST00000547018 PFN1P07737 140 aaKnown RBP10.15□□□□□ -0.79
SCAF11-209ENST00000547018 CD33P20138 364 aa10.15□□□□□ -0.79
SCAF11-209ENST00000547018 IER3P46695 156 aa10.15□□□□□ -0.79
SCAF11-209ENST00000547018 KCNIP4Q6PIL6 250 aa10.15□□□□□ -0.79
SCAF11-209ENST00000547018 PERPQ96FX8 193 aa10.15□□□□□ -0.79
SCAF11-209ENST00000547018 YPEL4Q96NS1 127 aa10.15□□□□□ -0.79
SCAF11-209ENST00000547018 SOX21Q9Y651 276 aaPredicted RBP10.15□□□□□ -0.79
SCAF11-209ENST00000547018 TRAV8-1A0A0A6YYK1 113 aa10.14□□□□□ -0.79
SCAF11-209ENST00000547018 OR2J3O76001 311 aa10.14□□□□□ -0.79
SCAF11-209ENST00000547018 PSG1P11464 419 aa10.14□□□□□ -0.79
SCAF11-209ENST00000547018 G0S2P27469 103 aa10.14□□□□□ -0.79
SCAF11-209ENST00000547018 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-209ENST00000547018 BCL6BQ8N143 479 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-209ENST00000547018 LINC00311Q8N616 119 aa10.14□□□□□ -0.79
SCAF11-209ENST00000547018 OR51M1Q9H341 326 aa10.14□□□□□ -0.79
SCAF11-209ENST00000547018 AMMECR1Q9Y4X0 333 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-209ENST00000547018 TRAPPC1Q9Y5R8 145 aa10.14□□□□□ -0.79
SCAF11-209ENST00000547018 KLF2Q9Y5W3 355 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-209ENST00000547018 GAR1Q9NY12 217 aaKnown RBP10.14□□□□□ -0.79
SCAF11-209ENST00000547018 PRRC2AP48634 2157 aaKnown RBP10.14□□□□□ -0.79
SCAF11-209ENST00000547018 IGHV3-66A0A0C4DH42 116 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 TCRBV4S1A1TA0A5B7 111 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 Q56UQ5 140 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 RASL11BQ9BPW5 248 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 TMEM167BQ9NRX6 74 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 IGKV1D-37A0A075B6S9 117 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 CXorf65A6NEN9 183 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 ZNF705GA8MUZ8 300 aaPredicted RBP10.13□□□□□ -0.79
SCAF11-209ENST00000547018 MRGPRG-AS1Q2M3A8 158 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 TEX38Q6PEX7 206 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 SLC25A2Q9BXI2 301 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 CTDSP1Q9GZU7 261 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 NBR2O15453 112 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 LY6EQ16553 131 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 IGFL4Q6B9Z1 124 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 TEX45Q8NA69 505 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 GNB4Q9HAV0 340 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 DMRT1Q9Y5R6 373 aa10.13□□□□□ -0.79
SCAF11-209ENST00000547018 IFITM10A6NMD0 228 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 HYPMO75409 117 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 TMEM11P17152 192 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 CEACAM3P40198 252 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 CX3CL1P78423 397 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 EXOC3-AS1Q8N2X6 119 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 CACNG8Q8WXS5 425 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 TMEM68Q96MH6 324 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 UBE2CO00762 179 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 ISLRO14498 428 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 IGHV2-5P01817 119 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 NEU4Q8WWR8 484 aaPredicted RBP10.12□□□□□ -0.79
SCAF11-209ENST00000547018 C17orf77Q96MU5 243 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 TPPP3Q9BW30 176 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
SCAF11-209ENST00000547018 A0A1B0GV90 55 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 GATCO43716 136 aaKnown RBP10.11□□□□□ -0.79
SCAF11-209ENST00000547018 GNG7O60262 68 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 IL4P05112 153 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 FCGR2BP31994 310 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-209ENST00000547018 BAGE2Q86Y30 109 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 PRORYQ9H606 182 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 TIMM8BQ9Y5J9 83 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-209ENST00000547018 NF1P21359 2839 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 OR2T8A6NH00 312 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 ZNF207O43670 478 aaKnown RBP10.11□□□□□ -0.79
SCAF11-209ENST00000547018 CAMPP49913 170 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 UBE2G1P62253 170 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 NDPQ00604 133 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 C11orf71Q6IPW1 123 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 Q71RC1 249 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-209ENST00000547018 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
SCAF11-209ENST00000547018 FAM168AQ92567 244 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 ANAPC16Q96DE5 110 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 TEX22C9J3V5 150 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 NBEAP1P0C6P0 100 aa10.11□□□□□ -0.79
SCAF11-209ENST00000547018 GPX4P36969 197 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-209ENST00000547018 A0A087X0M5 115 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 A0A1B0GX30 115 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 HOXA5P20719 270 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 PRTN3P24158 256 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 COL8A1P27658 744 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 ATP5J2P56134 94 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 BEND2Q8NDZ0 799 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 OR1L4Q8NGR5 311 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 FAM167A-AS1Q96KT0 104 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 F11RQ9Y624 299 aaKnown RBP10.1□□□□□ -0.79
SCAF11-209ENST00000547018 HELZ2Q9BYK8 2649 aaKnown RBP10.1□□□□□ -0.79
SCAF11-209ENST00000547018 SAA4P35542 130 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 PMS2P11Q13670 270 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 MRPL41Q8IXM3 137 aaKnown RBP10.1□□□□□ -0.79
SCAF11-209ENST00000547018 PFDN5Q99471 154 aa10.1□□□□□ -0.79
SCAF11-209ENST00000547018 TRBV24-1A0A075B6N3 115 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 G3V318 75 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 CDX1P47902 265 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-209ENST00000547018 CNN1P51911 297 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms