RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 KLF14Q8TD94 323 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-216ENST00000545170 WDR83OSQ9Y284 106 aa7.15□□□□□ -1.26
ATXN3-216ENST00000545170 PKIGQ9Y2B9 76 aa7.15□□□□□ -1.26
ATXN3-216ENST00000545170 TOGARAM1Q9Y4F4 1720 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 A0A0U1RQV1 116 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 FAM236AA0A1B0GUQ0 79 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 FAM236BA0A1B0GV22 79 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 ACP7Q6ZNF0 438 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 AKAP11Q9UKA4 1901 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 TRGV2A0A075B6R0 118 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 UPK2O00526 184 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 IL18BPO95998 194 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 ANAPC10Q9UM13 185 aa7.15□□□□□ -1.27
ATXN3-216ENST00000545170 A0A087WV48 116 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 TINCRA0A1B0GVN0 87 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 SRD5A1P18405 259 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 SLC50A1Q9BRV3 221 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 PRO1854Q9UHT4 67 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 PILRAQ9UKJ1 303 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 LTBP3Q9NS15 1303 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 DUTP33316 252 aaKnown RBP7.14□□□□□ -1.27
ATXN3-216ENST00000545170 TTTY12Q9BZ98 90 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 LRP5O75197 1615 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 IGHG2P01859 326 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 PFN1P07737 140 aaKnown RBP7.14□□□□□ -1.27
ATXN3-216ENST00000545170 SUPT4H1P63272 117 aaKnown RBP7.14□□□□□ -1.27
ATXN3-216ENST00000545170 NMSQ5H8A3 153 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 RNF125Q96EQ8 232 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 IGHV3-73A0A0B4J1V6 119 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 SRSF2Q01130 221 aaKnown RBP7.14□□□□□ -1.27
ATXN3-216ENST00000545170 SRXN1Q9BYN0 137 aa7.14□□□□□ -1.27
ATXN3-216ENST00000545170 PNRC2Q9NPJ4 139 aaKnown RBP7.14□□□□□ -1.27
ATXN3-216ENST00000545170 GBF1Q92538 1859 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 F8WEM9 126 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 LYL1P12980 280 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 PVRIGQ6DKI7 326 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 IGKV1-8A0A0C4DH67 115 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 A0A1B0GX51 115 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 FOXS1O43638 330 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 U3KQE9 123 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 NHSL1Q5SYE7 1610 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 CISD3P0C7P0 127 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 COL22A1Q8NFW1 1626 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-216ENST00000545170 KIR2DL5BA0A0G2JN68 375 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 KIR2DL5BA0A0G2JPC4 375 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 ATOX1O00244 68 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 SIVA1O15304 175 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 IGHG3P01860 377 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 HLA-DMBP28068 263 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 ZNF876PQ49A33 203 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 KIR2DL5AQ8N109 375 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 TUBGCP6Q96RT7 1819 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 ANKRD36A6QL64 1941 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 IGKV1D-8A0A087WSZ0 117 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 VCYO14598 125 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 DEFB125Q8N687 156 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 RPUSD1Q9UJJ7 312 aaKnown RBP7.13□□□□□ -1.27
ATXN3-216ENST00000545170 PTPRFP10586 1907 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 IGKV1D-33P01593 117 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 IGKV1-33P01594 117 aa7.13□□□□□ -1.27
ATXN3-216ENST00000545170 CKAP5Q14008 2032 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 SAA2-SAA4A0A096LPE2 208 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 SAA2P0DJI9 122 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-216ENST00000545170 FOXC1Q12948 553 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 TAL2Q16559 108 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 SPSB3Q6PJ21 355 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 RNF183Q96D59 192 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 SHISA9B4DS77 424 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 ZNF329Q86UD4 541 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 PRIMA1Q86XR5 153 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 DPH3P1Q9H4G8 78 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 C16orf97H3BN30 126 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 HLA-DRB4P13762 266 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 HOXD3P31249 432 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-216ENST00000545170 TMEM171Q8WVE6 324 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 IMMP1LQ96LU5 166 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 DCTN5Q9BTE1 182 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 GFRA4Q9GZZ7 299 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 HLA-DRB4X5D2U9 266 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 DOT1LQ8TEK3 1739 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 SCN1AP35498 2009 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 CLPSL1A2RUU4 121 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 LGALS9BQ3B8N2 356 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 FHL5Q5TD97 284 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 LGALS9CQ6DKI2 356 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 ARRDC1-AS1Q9H2J1 176 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 IGKV1D-43A0A0B4J1Z2 117 aa7.12□□□□□ -1.27
ATXN3-216ENST00000545170 WIPF3A6NGB9 483 aa7.11□□□□□ -1.27
ATXN3-216ENST00000545170 J3QRE1 110 aa7.11□□□□□ -1.27
ATXN3-216ENST00000545170 CFHR2P36980 270 aa7.11□□□□□ -1.27
ATXN3-216ENST00000545170 KLF2Q9Y5W3 355 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-216ENST00000545170 FAM90A9PA6NNJ1 464 aa7.11□□□□□ -1.27
ATXN3-216ENST00000545170 WFDC9Q8NEX5 89 aa7.11□□□□□ -1.27
ATXN3-216ENST00000545170 PAQR4Q8N4S7 273 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-216ENST00000545170 TRGV11A0A075B6L2 103 aa7.11□□□□□ -1.27
ATXN3-216ENST00000545170 NBL1P41271 181 aa7.11□□□□□ -1.27
ATXN3-216ENST00000545170 VWC2Q2TAL6 325 aa7.11□□□□□ -1.27
ATXN3-216ENST00000545170 CHCHD5Q9BSY4 110 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms