RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 CACNA1DQ01668 2161 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 ZNF253O75346 499 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 RNF224P0DH78 156 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 HILS1P60008 231 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 FAM53AQ6NSI3 398 aaPredicted RBP6.3□□□□□ -1.4
TRIM59-208ENST00000543469 CYB561D1Q8N8Q1 229 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 ZNF738Q8NE65 137 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 SPTBN1Q01082 2364 aaKnown RBP6.3□□□□□ -1.4
TRIM59-208ENST00000543469 TMEM218A2RU14 115 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 MYCNOSP40205 109 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 SIGLEC15Q6ZMC9 328 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 ZNF502Q8TBZ5 544 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 MRPL53Q96EL3 112 aaKnown RBP6.3□□□□□ -1.4
TRIM59-208ENST00000543469 C11orf1Q9H5F2 150 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.3□□□□□ -1.4
TRIM59-208ENST00000543469 DNAJC9-AS1A6NH13 148 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 GATCO43716 136 aaKnown RBP6.3□□□□□ -1.4
TRIM59-208ENST00000543469 PROP1O75360 226 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 IGHG4P01861 327 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 LINC00205P59089 165 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 RAB5BP61020 215 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 KLHL30-AS1Q8NEE0 82 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 SLC25A39Q9BZJ4 359 aaPredicted RBP6.3□□□□□ -1.4
TRIM59-208ENST00000543469 SH3BGRL3Q9H299 93 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 I3L2K1 104 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 FGF8P55075 233 aaPredicted RBP6.29□□□□□ -1.4
TRIM59-208ENST00000543469 KRTAP10-9P60411 292 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 ZNF331Q9NQX6 463 aaPredicted RBP6.29□□□□□ -1.4
TRIM59-208ENST00000543469 TPSG1Q9NRR2 321 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 LY96Q9Y6Y9 160 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 ZNF292O60281 2723 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 KIAA2026Q5HYC2 2103 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 PGPA6NDG6 321 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 SRSF1Q07955 248 aaKnown RBP eCLIP6.29□□□□□ -1.4
TRIM59-208ENST00000543469 C4orf3Q8WVX3 66 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 TMEM158Q8WZ71 300 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 SPTBN4Q9H254 2564 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 TRAV25A0A0B4J276 109 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 IGLC1P0CG04 106 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 ZFP30Q9Y2G7 519 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 ARFGEF3Q5TH69 2177 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 LY6G6DO95868 133 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 SUMO1P63165 101 aaKnown RBP6.29□□□□□ -1.4
TRIM59-208ENST00000543469 LCN12Q6JVE5 192 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 WDR73Q6P4I2 378 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 BAGE2Q86Y30 109 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 GBGT1Q8N5D6 347 aa6.29□□□□□ -1.4
TRIM59-208ENST00000543469 LSM4Q9Y4Z0 139 aaKnown RBP6.29□□□□□ -1.4
TRIM59-208ENST00000543469 ZNF98A6NK75 572 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 OR4B1Q8NGF8 309 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 ATG101Q9BSB4 218 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 CEP295Q9C0D2 2601 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 PCNTO95613 3336 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 USF3Q68DE3 2245 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 H3BRN7 92 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 IGHV3-11P01762 117 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 GPHB5Q86YW7 130 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 TRAV9-1A0A075B6T8 112 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 RANP62826 216 aaKnown RBP6.28□□□□□ -1.4
TRIM59-208ENST00000543469 PRR20EP86478 221 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 PRR20CP86479 221 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 PRR20DP86480 221 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 PRR20BP86481 221 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 PRR20AP86496 221 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 GUCA2BQ16661 112 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 MIR17HGQ75NE6 70 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 NDUFA11Q86Y39 141 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 C3orf56Q8N813 242 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 MLXQ9UH92 298 aa6.28□□□□□ -1.4
TRIM59-208ENST00000543469 FAM181BA6NEQ2 426 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 ERVFC1-1P60608 527 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 OR5I1Q13606 314 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 LEMD1Q68G75 181 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 Q6AWC8 147 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 OR10G8Q8NGN5 311 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 RAI1Q7Z5J4 1906 aaPredicted RBP6.27□□□□□ -1.41
TRIM59-208ENST00000543469 MFSD2BA6NFX1 497 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 C1orf196B1AJZ1 125 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 PEX7O00628 323 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 P01737 135 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 CDX1P47902 265 aaPredicted RBP6.27□□□□□ -1.41
TRIM59-208ENST00000543469 BRWD1-AS2P59051 145 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 SEPSECSQ9HD40 501 aaKnown RBP6.27□□□□□ -1.41
TRIM59-208ENST00000543469 ABCA4P78363 2273 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 K7EIM0 57 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 INSL3P51460 131 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 ZNF343Q6P1L6 599 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 REC114Q7Z4M0 266 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 LINC00052Q96N35 136 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 ASCL2Q99929 193 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 SOX21Q9Y651 276 aaPredicted RBP6.27□□□□□ -1.41
TRIM59-208ENST00000543469 NBASA2RRP1 2371 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 RIGQ13278 110 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 SMUG1Q53HV7 270 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 TCF24Q7RTU0 167 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 LINC00477Q96M19 166 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 Q9H3A6 140 aa6.27□□□□□ -1.41
TRIM59-208ENST00000543469 A0A1B0GW15 77 aa6.26□□□□□ -1.41
TRIM59-208ENST00000543469 CXorf65A6NEN9 183 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms