RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 RNASE7Q9H1E1 156 aaKnown RBP8.18□□□□□ -1.1
TOP3A-208ENST00000542570 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 IBA57Q5T440 356 aaKnown RBP8.18□□□□□ -1.1
TOP3A-208ENST00000542570 TEX45Q8NA69 505 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 NEU1Q99519 415 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 GRIFINA4D1Z8 144 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 PMS2P5A8MQ11 134 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 SIAH2O43255 324 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 ZNF253O75346 499 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 Q6ZSR3 168 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 PGLYRP4Q96LB8 373 aa8.18□□□□□ -1.1
TOP3A-208ENST00000542570 DCHS1Q96JQ0 3298 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 RNF224P0DH78 156 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 PPIFP30405 207 aaKnown RBP8.17□□□□□ -1.1
TOP3A-208ENST00000542570 TMEM167AQ8TBQ9 72 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 RNF2Q99496 336 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 LOC389332A0A1B0GUA5 103 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 MSMBP08118 114 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 RNASE2P10153 161 aaKnown RBP8.17□□□□□ -1.1
TOP3A-208ENST00000542570 PNRC1Q12796 327 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-208ENST00000542570 PMS2P11Q13670 270 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 OR1L6Q8NGR2 347 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 IMMP2LQ96T52 175 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 HELZ2Q9BYK8 2649 aaKnown RBP8.17□□□□□ -1.1
TOP3A-208ENST00000542570 J3QKU1 62 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 M0R3E3 92 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 TMEM177Q53S58 311 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 ELOVL1Q9BW60 279 aa8.17□□□□□ -1.1
TOP3A-208ENST00000542570 DMDP11532 3685 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 TMEM8BA6NDV4 472 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 FGF16O43320 207 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 FOXA3P55318 350 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-208ENST00000542570 TMEM95Q3KNT9 176 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 RNF125Q96EQ8 232 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 CHRDL1Q9BU40 450 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 COL4A2P08572 1712 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 HIST1H1AQ02539 215 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-208ENST00000542570 MST1LQ2TV78 715 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 C1orf229Q6ZS94 237 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-208ENST00000542570 EEF1AKMT3Q96AZ1 226 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 E7EUB6 86 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 IGHV2-70P01814 119 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 CBLN1P23435 193 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 ZNF506Q5JVG8 444 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 PRORYQ9H606 182 aa8.16□□□□□ -1.1
TOP3A-208ENST00000542570 SOX21Q9Y651 276 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-208ENST00000542570 ELOA3CA0A087WX78 387 aaPredicted RBP8.15□□□□□ -1.1
TOP3A-208ENST00000542570 ATP6V0E1O15342 81 aa8.15□□□□□ -1.1
TOP3A-208ENST00000542570 AGAP20933 346 aa8.15□□□□□ -1.1
TOP3A-208ENST00000542570 DLX6P56179 175 aa8.15□□□□□ -1.1
TOP3A-208ENST00000542570 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
TOP3A-208ENST00000542570 CACNG8Q8WXS5 425 aa8.15□□□□□ -1.1
TOP3A-208ENST00000542570 PRO1933Q9H354 126 aa8.15□□□□□ -1.1
TOP3A-208ENST00000542570 IGHV4-38-2P0DP08 117 aa8.15□□□□□ -1.1
TOP3A-208ENST00000542570 RELQ04864 619 aaPredicted RBP8.15□□□□□ -1.1
TOP3A-208ENST00000542570 OR5AN1Q8NGI8 311 aa8.15□□□□□ -1.1
TOP3A-208ENST00000542570 BTF3L4Q96K17 158 aa8.15□□□□□ -1.1
TOP3A-208ENST00000542570 GAR1Q9NY12 217 aaKnown RBP8.15□□□□□ -1.1
TOP3A-208ENST00000542570 CRISP2P16562 243 aa8.15□□□□□ -1.11
TOP3A-208ENST00000542570 DPPA3Q6W0C5 159 aa8.15□□□□□ -1.11
TOP3A-208ENST00000542570 RBPMS2Q6ZRY4 209 aaKnown RBP8.15□□□□□ -1.11
TOP3A-208ENST00000542570 SIGLECL1Q8N7X8 197 aa8.15□□□□□ -1.11
TOP3A-208ENST00000542570 RNASEH2CQ8TDP1 164 aaKnown RBP8.15□□□□□ -1.11
TOP3A-208ENST00000542570 TRAV20A0A0B4J274 112 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 TCRBV4S1A1TA0A5B7 111 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 IGLV2-14P01704 120 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 AMTP48728 403 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 FAM106AQ4KMX7 169 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 HIST2H2BDQ6DRA6 164 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 TCF23Q7RTU1 214 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 TRAV41A0A0B4J266 112 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 RPL7P18124 248 aaKnown RBP8.14□□□□□ -1.11
TOP3A-208ENST00000542570 IL15RAQ13261 267 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 C3orf36Q3SXR2 165 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 C11orf42Q8N5U0 333 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 PRSS3P2Q8NHM4 247 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 OCC1Q8TAD7 63 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 REG4Q9BYZ8 158 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 NDUFB8O95169 186 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 Q9H3A6 140 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 TEP1Q99973 2627 aaKnown RBP8.14□□□□□ -1.11
TOP3A-208ENST00000542570 GZMBP10144 247 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 OR1P1Q8NH06 330 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 TNFRSF14Q92956 283 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 HIST1H2BAQ96A08 127 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 TMEM14BQ9NUH8 114 aa8.14□□□□□ -1.11
TOP3A-208ENST00000542570 IGHV2-70DA0A0C4DH43 119 aa8.13□□□□□ -1.11
TOP3A-208ENST00000542570 RPL29P47914 159 aaKnown RBP8.13□□□□□ -1.11
TOP3A-208ENST00000542570 BLCAPP62952 87 aa8.13□□□□□ -1.11
TOP3A-208ENST00000542570 CR1LQ2VPA4 569 aa8.13□□□□□ -1.11
TOP3A-208ENST00000542570 ZNF705AQ6ZN79 300 aaPredicted RBP8.13□□□□□ -1.11
TOP3A-208ENST00000542570 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
TOP3A-208ENST00000542570 MGPP08493 103 aa8.13□□□□□ -1.11
TOP3A-208ENST00000542570 ADCYAP1P18509 176 aa8.13□□□□□ -1.11
TOP3A-208ENST00000542570 COMPP49747 757 aaPredicted RBP8.13□□□□□ -1.11
TOP3A-208ENST00000542570 GPR61Q9BZJ8 451 aa8.13□□□□□ -1.11
TOP3A-208ENST00000542570 FNDC4Q9H6D8 234 aaPredicted RBP8.13□□□□□ -1.11
TOP3A-208ENST00000542570 ZNF257Q9Y2Q1 563 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms