RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ANAPC16Q96DE5 110 aa13.5□□□□□ -0.25
LTBR-207ENST00000539925 HSPB9Q9BQS6 159 aa13.5□□□□□ -0.25
LTBR-207ENST00000539925 A6NDX4 124 aa13.49□□□□□ -0.25
LTBR-207ENST00000539925 C9JCJ5 164 aa13.49□□□□□ -0.25
LTBR-207ENST00000539925 AKR1C3P42330 323 aa13.49□□□□□ -0.25
LTBR-207ENST00000539925 RPL23P62829 140 aaKnown RBP13.49□□□□□ -0.25
LTBR-207ENST00000539925 NECAP1Q8NC96 275 aa13.49□□□□□ -0.25
LTBR-207ENST00000539925 OR5T1Q8NG75 326 aa13.49□□□□□ -0.25
LTBR-207ENST00000539925 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
LTBR-207ENST00000539925 TMEM14CQ9P0S9 112 aa13.49□□□□□ -0.25
LTBR-207ENST00000539925 FBXL7Q9UJT9 491 aa13.49□□□□□ -0.25
LTBR-207ENST00000539925 PPP1R2P9O14990 202 aa13.48□□□□□ -0.25
LTBR-207ENST00000539925 ATF4P18848 351 aaPredicted RBP13.48□□□□□ -0.25
LTBR-207ENST00000539925 NPPCP23582 126 aa13.48□□□□□ -0.25
LTBR-207ENST00000539925 LYZP61626 148 aa13.48□□□□□ -0.25
LTBR-207ENST00000539925 Q56UQ5 140 aa13.48□□□□□ -0.25
LTBR-207ENST00000539925 KLF17Q5JT82 389 aaPredicted RBP13.48□□□□□ -0.25
LTBR-207ENST00000539925 TEX29Q8N6K0 151 aa13.48□□□□□ -0.25
LTBR-207ENST00000539925 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 BRI3O95415 125 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 TGFAP01135 160 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 COL8A1P27658 744 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.47□□□□□ -0.256e-7■■■□□ 17.1
LTBR-207ENST00000539925 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 WI2-2373I1.2A0A1W2PRP0 233 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 H3BUA1 57 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 OR2J3O76001 311 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 OR10J4P0C629 311 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 KRTAP10-9P60411 292 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 KIAA0141Q14154 515 aaPredicted RBP13.47□□□□□ -0.25
LTBR-207ENST00000539925 ECSCRQ19T08 205 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 HIST1H2BAQ96A08 127 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 RNF125Q96EQ8 232 aa13.47□□□□□ -0.25
LTBR-207ENST00000539925 SLC25A39Q9BZJ4 359 aaPredicted RBP13.47□□□□□ -0.25
LTBR-207ENST00000539925 TRAV5A0A0B4J249 113 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 RNF223E7ERA6 249 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 H3BUX3 64 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 NDUFB8O95169 186 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 IGF1P05019 195 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 MORN5Q5VZ52 161 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 OR5R1Q8NH85 324 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 PSMG3-AS1Q96PY0 264 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 SHANK2-AS3Q9BTD1 123 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 MLXQ9UH92 298 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 ZNF580Q9UK33 172 aa13.46□□□□□ -0.26
LTBR-207ENST00000539925 TRBV7-1A0A0A6YYK4 115 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 TRAV41A0A0B4J266 112 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 FAM223BA6NKX1 122 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 TGOLN2O43493 480 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 IGHV4-31P0DP07 118 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 S100PP25815 95 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 SUMO1P63165 101 aaKnown RBP13.45□□□□□ -0.26
LTBR-207ENST00000539925 C9orf139Q6ZV77 190 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 LINC01551Q86U37 167 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 FAM223AQ8IWN6 122 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 ZNF491Q8N8L2 437 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 EEF1AKMT3Q96AZ1 226 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 BTF3L4Q96K17 158 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 OR5B12Q96R08 314 aa13.45□□□□□ -0.26
LTBR-207ENST00000539925 GSX1Q9H4S2 264 aaPredicted RBP13.45□□□□□ -0.26
LTBR-207ENST00000539925 GGTLC3B5MD39 225 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 H7BYZ3 331 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 IGHG2P01859 326 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 NBEAP1P0C6P0 100 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 HIST1H1EP10412 219 aaKnown RBP13.44□□□□□ -0.26
LTBR-207ENST00000539925 RAB5AP20339 215 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 TAS2R60P59551 318 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 RHOGP84095 191 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 FLI1Q01543 452 aaPredicted RBP13.44□□□□□ -0.26
LTBR-207ENST00000539925 TMEM219Q86XT9 240 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 BPIFA4PQ86YQ2 179 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 FAM24BQ8N5W8 94 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 ISOC2Q96AB3 205 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 YPEL4Q96NS1 127 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 HELTA6NFD8 242 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 H3BRN7 92 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 AVPP01185 164 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 AMY1AP04745 511 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 IL4P05112 153 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 S100A9P06702 114 aaKnown RBP13.44□□□□□ -0.26
LTBR-207ENST00000539925 GP9P14770 177 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 C19orf54Q5BKX5 351 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 ZNF502Q8TBZ5 544 aa13.44□□□□□ -0.26
LTBR-207ENST00000539925 PTPN13Q12923 2485 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 ABCA1O95477 2261 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 F8W735 103 aaPredicted RBP13.43□□□□□ -0.26
LTBR-207ENST00000539925 PYYP10082 97 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 RPL35P42766 123 aaKnown RBP13.43□□□□□ -0.26
LTBR-207ENST00000539925 RAB9AP51151 201 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 C15orf32Q32M92 178 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 CYB5R2Q6BCY4 276 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 ZNF343Q6P1L6 599 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 ZNF600Q6ZNG1 722 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 OR4F17Q8NGA8 305 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 C2CD4CQ8TF44 421 aa13.43□□□□□ -0.26
LTBR-207ENST00000539925 USP9YO00507 2555 aaPredicted RBP13.42□□□□□ -0.26
LTBR-207ENST00000539925 C1orf196B1AJZ1 125 aa13.42□□□□□ -0.26
LTBR-207ENST00000539925 FSHBP01225 129 aa13.42□□□□□ -0.26
LTBR-207ENST00000539925 CRYBB3P26998 211 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms