RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ACTL6BO94805 426 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 MT-ATP8P03928 68 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 C3AR1Q16581 482 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 ATP6V0E2Q8NHE4 81 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 TMEM140Q9NV12 185 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 PF4V1P10720 104 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 TREML4Q6UXN2 200 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 PRSS3P2Q8NHM4 247 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 FAM57AQ8TBR7 257 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 C20orf78Q9BR46 151 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 IGHV3-64DA0A0J9YX35 117 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 FGF6P10767 208 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 TCTAP57738 103 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 TTC32Q5I0X7 151 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 LINC00596Q86U02 117 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 UCN2Q96RP3 112 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 MGST2Q99735 147 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 VKORC1Q9BQB6 163 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 LRRK1Q38SD2 2015 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 MYO7BQ6PIF6 2116 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 ANKRD11Q6UB99 2663 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 TIMM8AO60220 97 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 TBC1D28Q2M2D7 210 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 TEPPQ6URK8 271 aa8.91□□□□□ -0.98
CLSTN3-207ENST00000537408 ARHGAP21Q5T5U3 1957 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 H3BMG7 143 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 GRPP07492 148 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 CT45A10P0DMU9 189 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 PRSS12P56730 875 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 FOXI1Q12951 378 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 TMEM42Q69YG0 159 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 DRAM1Q8N682 238 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 TMUB1Q9BVT8 246 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 GTF3C1Q12789 2109 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 GDF5OSQ5U4N7 250 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 ACP7Q6ZNF0 438 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 DAZAP1Q96EP5 407 aaKnown RBP8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 URB1-AS1Q96HZ7 61 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 GNG12Q9UBI6 72 aa8.9□□□□□ -0.98
CLSTN3-207ENST00000537408 TMEM262E9PQX1 116 aa8.9□□□□□ -0.99
CLSTN3-207ENST00000537408 MZT1Q08AG7 82 aa8.9□□□□□ -0.99
CLSTN3-207ENST00000537408 HES7Q9BYE0 225 aa8.9□□□□□ -0.99
CLSTN3-207ENST00000537408 TRBV6-6A0A0A6YYG2 114 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 hCG_38984A0A1B0GV85 526 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 C15orf62A8K5M9 175 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 NPIPB11E5RHQ5 1161 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 ZNF32P17041 273 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 RAB1BQ9H0U4 201 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 A0A0J9YW62 118 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 FOXH1O75593 365 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 PATE4P0C8F1 98 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 GNG3P63215 75 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 LCNL1Q6ZST4 164 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 LINC00312Q9Y6C7 94 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 MED12Q93074 2177 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 WT1P19544 449 aaPredicted RBP8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 ID1P41134 155 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 FOXL2NBQ6ZUU3 175 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 RBMXL3Q8N7X1 1067 aaKnown RBP8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 ZNF441Q8N8Z8 693 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 OSR1Q8TAX0 266 aaPredicted RBP8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 ZNF747Q9BV97 191 aa8.89□□□□□ -0.99
CLSTN3-207ENST00000537408 ZIC3O60481 467 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 ZNF137PP52743 207 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 LGALS9BQ3B8N2 356 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 LGALS9CQ6DKI2 356 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 MPC1Q9Y5U8 109 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 KMT2EQ8IZD2 1858 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 CPAMD8Q8IZJ3 1885 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 TRAV5A0A0B4J249 113 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 A0A1W2PNU3 283 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 E9PLD3 99 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 APOHP02749 345 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 C10orf128Q5T292 105 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 NFAM1Q8NET5 270 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 FAM168AQ92567 244 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 RTL8AQ9BWD3 113 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 MIR17HGQ75NE6 70 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 IGF2BP2-AS1Q96M15 143 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 PRELID3AQ96N28 172 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 RAB9BQ9NP90 201 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 IGLL5B9A064 214 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 C16orf97H3BN30 126 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 K7ERJ3 54 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 NTF4P34130 210 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 COL4A2P08572 1712 aa8.88□□□□□ -0.99
CLSTN3-207ENST00000537408 C10orf142B7Z368 130 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 ZNF414Q96IQ9 312 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 HSD17B10Q99714 261 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 POLDIP2Q9Y2S7 368 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 CA6P23280 308 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 GAGE2BQ13066 116 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 GAGE2EQ4V326 116 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 TUSC5Q8IXB3 177 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 ZNF843Q8N446 348 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 CHAC1Q9BUX1 264 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 HIGD1BQ9P298 99 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 GAGE2DQ9UEU5 116 aa8.87□□□□□ -0.99
CLSTN3-207ENST00000537408 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms