RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 XIRP1Q702N8 1843 aaKnown RBP2.07□□□□□ -2.08
ME3-211ENST00000534638 ARAP1Q96P48 1450 aa2.07□□□□□ -2.08
ME3-211ENST00000534638 SHANK1Q9Y566 2161 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 WDR90Q96KV7 1748 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 NUP210LQ5VU65 1888 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 BORCS7-ASMTA0A0B4J1R7 106 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 TRAV3A0A0B4J244 114 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 IGHV1-18A0A0C4DH31 117 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 J3QQQ9 107 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 PSCAO43653 123 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 GGCTO75223 188 aaKnown RBP2.06□□□□□ -2.08
ME3-211ENST00000534638 DBIP07108 87 aaKnown RBP2.06□□□□□ -2.08
ME3-211ENST00000534638 SDC2P34741 201 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 KRTAP10-3P60369 221 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 DYNLT1P63172 113 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 HBBP68871 147 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 EIF5AL1Q6IS14 154 aaKnown RBP2.06□□□□□ -2.08
ME3-211ENST00000534638 C22orf39Q6P5X5 142 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 LCN15Q6UWW0 184 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 C4orf22Q6V702 233 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 DYNAPQ8N1N2 210 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 WFDC11Q8NEX6 87 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 ZNF714Q96N38 554 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 YPEL2Q96QA6 119 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 ZNF471Q9BX82 626 aaPredicted RBP2.06□□□□□ -2.08
ME3-211ENST00000534638 PAIP2BQ9ULR5 123 aaKnown RBP2.06□□□□□ -2.08
ME3-211ENST00000534638 U3KQ87 197 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 EML6Q6ZMW3 1958 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 RFX7Q2KHR2 1363 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 PRRC2AP48634 2157 aaKnown RBP2.06□□□□□ -2.08
ME3-211ENST00000534638 MALRD1Q5VYJ5 2156 aa2.06□□□□□ -2.08
ME3-211ENST00000534638 NUP210Q8TEM1 1887 aaPredicted RBP2.05□□□□□ -2.08
ME3-211ENST00000534638 TRBV10-2A0A0K0K1G8 114 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 ARRDC5A6NEK1 342 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 EFCAB10A6NFE3 127 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 OR2H2O95918 312 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 C1QCP02747 245 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 CTSGP08311 255 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 MPC1LP0DKB6 136 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 PSG9Q00887 426 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 VMA21Q3ZAQ7 101 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 TMEM244Q5VVB8 128 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 LINC00305Q7Z4B0 112 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 OR4K15Q8NH41 348 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 BRK1Q8WUW1 75 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 AP1S3Q96PC3 154 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 NIT2Q9NQR4 276 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 SPANXCQ9NY87 97 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 CCDC171Q6TFL3 1326 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 CD109Q6YHK3 1445 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 SPATA31E1Q6ZUB1 1445 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 TOPBP1Q92547 1522 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 MED1Q15648 1581 aaPredicted RBP2.05□□□□□ -2.08
ME3-211ENST00000534638 OBSL1O75147 1896 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 ARHGAP32A7KAX9 2087 aa2.05□□□□□ -2.08
ME3-211ENST00000534638 TRGV10A0A0A0MS01 117 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 TRAV5A0A0B4J249 113 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 A0A0D9SG52 128 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 OVOS2A0A0G2JMS6 1433 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 LOC107984640A0A0U1RRK4 108 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 A0A1B0GV90 55 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 CCDC160A6NGH7 325 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 ODF3BA8MYP8 253 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 G3V3Q6 166 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 TCL1BO95988 128 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 CLPSP04118 112 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 HTR1AP08908 422 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 TRGC1P0CF51 173 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 HLA-EP13747 358 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 NFYAP23511 347 aaPredicted RBP2.04□□□□□ -2.08
ME3-211ENST00000534638 RAB5CP51148 216 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 AQP4P55087 323 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 NDUFA6P56556 154 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 COL16A1Q07092 1604 aaPredicted RBP2.04□□□□□ -2.08
ME3-211ENST00000534638 ZNF791Q3KP31 576 aaPredicted RBP2.04□□□□□ -2.08
ME3-211ENST00000534638 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 Q5XG85 94 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 Q6ZQT0 140 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 N4BP2Q86UW6 1770 aaPredicted RBP2.04□□□□□ -2.08
ME3-211ENST00000534638 LRRC28Q86X40 367 aaPredicted RBP2.04□□□□□ -2.08
ME3-211ENST00000534638 TCTE3Q8IZS6 198 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 C10orf126Q8N4M7 172 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 SLC30A7Q8NEW0 376 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 OR4E2Q8NGC2 313 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 OR4X2Q8NGF9 303 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 RNASE11Q8TAA1 199 aaKnown RBP2.04□□□□□ -2.08
ME3-211ENST00000534638 LXNQ9BS40 222 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 TAF9BQ9HBM6 251 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 CBLN4Q9NTU7 201 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 CEP164Q9UPV0 1460 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 BAIAP2Q9UQB8 552 aa2.04□□□□□ -2.08
ME3-211ENST00000534638 SLX4Q8IY92 1834 aa2.03□□□□□ -2.08
ME3-211ENST00000534638 IGKV1D-42A0A075B6H8 117 aa2.03□□□□□ -2.08
ME3-211ENST00000534638 IGLV3-9A0A075B6K5 115 aa2.03□□□□□ -2.08
ME3-211ENST00000534638 IGHV1-58A0A0C4DH39 117 aa2.03□□□□□ -2.08
ME3-211ENST00000534638 A0A1W2PNN7 141 aa2.03□□□□□ -2.08
ME3-211ENST00000534638 H3BMG7 143 aa2.03□□□□□ -2.08
ME3-211ENST00000534638 DPM2O94777 84 aa2.03□□□□□ -2.08
ME3-211ENST00000534638 PAEPP09466 180 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms