RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 MINOS1Q5TGZ0 78 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 OR10J6PQ8NGY7 276 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 RAXQ9Y2V3 346 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 MINOS1-NBL1R4GNA1 71 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 TTC3P53804 2025 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 THSD7BQ9C0I4 1608 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 MBD3L4A6NDZ8 208 aaPredicted RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 MBD3L3A6NE82 208 aaPredicted RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 MBD3L5A6NJ08 208 aaPredicted RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 C15orf65H3BRN8 121 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 CEACAM4O75871 244 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 RPL32P62910 135 aaKnown RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 SSBP2P81877 361 aaPredicted RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 C1orf185Q5T7R7 199 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 MBD3L2Q8NHZ7 208 aaPredicted RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 ZDHHC16Q969W1 377 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 FOXC2Q99958 501 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 ANAPC13Q9BS18 74 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 PRDM6Q9NQX0 595 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 H3BT86 120 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 CD59P13987 128 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 CRYBA4P53673 196 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 DLX6P56179 175 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 RPL39P5Q59GN2 51 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 UTF1Q5T230 341 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 PRNTQ86SH4 94 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 SCGB3A1Q96QR1 104 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 GOLGA4Q13439 2230 aaKnown RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 C17orf100A8MU93 164 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 F8VRH5 84 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 NBR2O15453 112 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 PSG1P11464 419 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 FOXI2Q6ZQN5 318 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 C1orf122Q6ZSJ8 110 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 TEN1Q86WV5 123 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 IGF2BP2-AS1Q96M15 143 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 CCL13Q99616 98 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 M0R3E3 92 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 IGLV1-44P01699 117 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 TEX36Q5VZQ5 186 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 EBLN2Q6P2I7 272 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 ZNF826PQ6ZT77 177 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 GATD1Q8NB37 220 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 METTL26Q96S19 204 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 MRPL20Q9BYC9 149 aaKnown RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 RP1L1Q8IWN7 2480 aaPredicted RBP3.29□□□□□ -1.88
SOX6-217ENST00000533870 LOC107984156A0A0G2JMH3 177 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 ZXDAP98168 799 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 ARL17AQ8IVW1 177 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 ODF3L1Q8IXM7 274 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 ATOH7Q8N100 152 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 MDS2Q8NDY4 140 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 DPH3P1Q9H4G8 78 aa3.29□□□□□ -1.88
SOX6-217ENST00000533870 FAM106CPP0CH98 169 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 CCL2P13500 99 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 CKS1BP61024 79 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 ATXN8Q156A1 80 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 TMEM155Q4W5P6 130 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 LCN12Q6JVE5 192 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 ZNF418Q8TF45 676 aaPredicted RBP3.28□□□□□ -1.88
SOX6-217ENST00000533870 LINC00477Q96M19 166 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 MLST8Q9BVC4 326 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 C19orf71A6NCJ1 209 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
SOX6-217ENST00000533870 GAGE5Q13069 117 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 GAGE6Q13070 117 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 RNF144BQ7Z419 303 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 KIR3DL3Q8N743 410 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 BRWD1Q9NSI6 2320 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 RFPL3SP0C7P2 107 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 CD40P25942 277 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 CDKN1AP38936 164 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 LAGE3Q14657 143 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 ETDBQ3ZM63 59 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 CEP290O15078 2479 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 CROCCQ5TZA2 2017 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 TRAV8-6A0A0B4J262 113 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 A0A1W2PRD5 423 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 A0A1W2PRF3 423 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 A0A1W2PRM7 423 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 TMEM8BA6NDV4 472 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 UQCRFS1P47985 274 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 SPINK9Q5DT21 86 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 ZNF833PQ6ZTB9 187 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 ZNF295-AS1Q8N0V1 137 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 SVIPQ8NHG7 77 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 EEF1AKMT3Q96AZ1 226 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 TMUB1Q9BVT8 246 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 TP73-AS1Q9UF72 201 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 MYH9P35579 1960 aaKnown RBP3.28□□□□□ -1.88
SOX6-217ENST00000533870 RALGAPA2Q2PPJ7 1873 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 SRRM4A7MD48 611 aaKnown RBP3.28□□□□□ -1.88
SOX6-217ENST00000533870 FCGR2BP31994 310 aaPredicted RBP3.28□□□□□ -1.88
SOX6-217ENST00000533870 CARD19Q96LW7 228 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 SMIM2Q9BVW6 85 aa3.28□□□□□ -1.88
SOX6-217ENST00000533870 PARP14Q460N5 1801 aa3.28□□□□□ -1.89
SOX6-217ENST00000533870 LINC01565O15544 149 aa3.28□□□□□ -1.89
SOX6-217ENST00000533870 NPYP01303 97 aa3.28□□□□□ -1.89
SOX6-217ENST00000533870 PYYP10082 97 aa3.28□□□□□ -1.89
SOX6-217ENST00000533870 ADAMTSL5Q6ZMM2 481 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms