RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 CT45A5P0DMU8 189 aa11.94□□□□□ -0.5
CAPN1-224ENST00000533129 CT45A7P0DMV0 189 aa11.94□□□□□ -0.5
CAPN1-224ENST00000533129 MUC21Q5SSG8 566 aa11.94□□□□□ -0.5
CAPN1-224ENST00000533129 OR10W1Q8NGF6 305 aa11.94□□□□□ -0.5
CAPN1-224ENST00000533129 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
CAPN1-224ENST00000533129 ZNF430Q9H8G1 570 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-224ENST00000533129 A8MWL6 223 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 FSTL3O95633 263 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 LIPFP07098 398 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 PSG1P11464 419 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 PATE2Q6UY27 113 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 LINC00173Q6ZV60 143 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 TCF24Q7RTU0 167 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 FAM57AQ8TBR7 257 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 GPR82Q96P67 336 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 VPS25Q9BRG1 176 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 PRSS22Q9GZN4 317 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 EPDR1Q9UM22 224 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 FAM215AQ9Y5M1 114 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 CD5LO43866 347 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 LHBP01229 141 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 FOXA3P55318 350 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-224ENST00000533129 ERHP84090 104 aaKnown RBP11.93□□□□□ -0.5
CAPN1-224ENST00000533129 TMEM30BQ3MIR4 351 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 ERASQ7Z444 233 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 MLST8Q9BVC4 326 aa11.93□□□□□ -0.5
CAPN1-224ENST00000533129 IGHV1-18A0A0C4DH31 117 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 TCRBV4S1A1TA0A5B7 111 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 GNG5P63218 68 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 HIST1H1AQ02539 215 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-224ENST00000533129 ZNF492Q9P255 531 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 CFAP47Q6ZTR5 3102 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 SLC25A48Q6ZT89 311 aaKnown RBP11.92□□□□□ -0.5
CAPN1-224ENST00000533129 MOGAT3Q86VF5 341 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 PDPNQ86YL7 162 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 MAP1LC3CQ9BXW4 147 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 GFRA4Q9GZZ7 299 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 RNF24Q9Y225 148 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 TNCP24821 2201 aa11.92□□□□□ -0.5
CAPN1-224ENST00000533129 SSBP2P81877 361 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-224ENST00000533129 AMMECR1LQ6DCA0 310 aa11.91□□□□□ -0.5
CAPN1-224ENST00000533129 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-224ENST00000533129 NDFIP1Q9BT67 221 aa11.91□□□□□ -0.5
CAPN1-224ENST00000533129 ZNF835Q9Y2P0 537 aa11.91□□□□□ -0.5
CAPN1-224ENST00000533129 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
CAPN1-224ENST00000533129 SLC25A5P05141 298 aaKnown RBP11.91□□□□□ -0.5
CAPN1-224ENST00000533129 THAP8Q8NA92 274 aa11.91□□□□□ -0.5
CAPN1-224ENST00000533129 GTSF1Q8WW33 167 aa11.91□□□□□ -0.5
CAPN1-224ENST00000533129 ZNF71Q9NQZ8 489 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-224ENST00000533129 C19orf71A6NCJ1 209 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 Q8NA96 180 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 FAM222BQ8WU58 562 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 H1FXQ92522 213 aaKnown RBP11.9□□□□□ -0.5
CAPN1-224ENST00000533129 IGKV1D-37A0A075B6S9 117 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 LOC102724200A0A096LPH7 203 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-224ENST00000533129 CBY3A6NI87 242 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 P01737 135 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 PSG9Q00887 426 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 FAM71F2Q6NXP2 309 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 RBPMS2Q6ZRY4 209 aaKnown RBP11.9□□□□□ -0.5
CAPN1-224ENST00000533129 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
CAPN1-224ENST00000533129 DSCAMO60469 2012 aa11.9□□□□□ -0.51
CAPN1-224ENST00000533129 FAM231BA6NCW3 169 aa11.9□□□□□ -0.51
CAPN1-224ENST00000533129 MOSP00540 346 aa11.9□□□□□ -0.51
CAPN1-224ENST00000533129 MSMPQ1L6U9 139 aa11.9□□□□□ -0.51
CAPN1-224ENST00000533129 SPRNQ5BIV9 151 aa11.9□□□□□ -0.51
CAPN1-224ENST00000533129 LINC00305Q7Z4B0 112 aa11.9□□□□□ -0.51
CAPN1-224ENST00000533129 FMC1Q96HJ9 113 aa11.9□□□□□ -0.51
CAPN1-224ENST00000533129 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.51
CAPN1-224ENST00000533129 RPUSD1Q9UJJ7 312 aaKnown RBP11.9□□□□□ -0.51
CAPN1-224ENST00000533129 LTAP01374 205 aa11.89□□□□□ -0.51
CAPN1-224ENST00000533129 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-224ENST00000533129 BHLHA15Q7RTS1 189 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-224ENST00000533129 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
CAPN1-224ENST00000533129 PGLYRP4Q96LB8 373 aa11.89□□□□□ -0.51
CAPN1-224ENST00000533129 FNDC4Q9H6D8 234 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-224ENST00000533129 K7ERU9 68 aa11.89□□□□□ -0.51
CAPN1-224ENST00000533129 ZNF833PQ6ZTB9 187 aa11.89□□□□□ -0.51
CAPN1-224ENST00000533129 PERPQ96FX8 193 aa11.89□□□□□ -0.51
CAPN1-224ENST00000533129 PMCHL2Q9BQD1 86 aa11.89□□□□□ -0.51
CAPN1-224ENST00000533129 RAXQ9Y2V3 346 aa11.89□□□□□ -0.51
CAPN1-224ENST00000533129 PGPA6NDG6 321 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 PRRG2O14669 202 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 CD24P25063 80 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 TMEM177Q53S58 311 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 PRR31Q5SQ13 230 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 LINC01545Q5VT33 79 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 RPRMLQ8N4K4 120 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 FAM169BQ8N8A8 192 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 CHEK1O14757 476 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 APOA2P02652 100 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 GPR183P32249 361 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■□□□□ 8.5
CAPN1-224ENST00000533129 APC2O95996 2303 aa11.88□□□□□ -0.51
CAPN1-224ENST00000533129 NBEAQ8NFP9 2946 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms