RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ASPHD1Q5U4P2 390 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 MORN5Q5VZ52 161 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 TEX38Q6PEX7 206 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 OR5T1Q8NG75 326 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 SGMS2Q8NHU3 365 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 VN1R17PQ8TDU5 208 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 SMIM12Q96EX1 92 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 GAR1Q9NY12 217 aaKnown RBP11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 CDC42EP3Q9UKI2 254 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 HRNRQ86YZ3 2850 aaPredicted RBP11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 CACNA1BQ00975 2339 aa11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 ACACBO00763 2458 aa11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 IGHV3-21A0A0B4J1V1 117 aa11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 GNG7O60262 68 aa11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 MYCNOSP40205 109 aa11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 C19orf35Q6ZS72 473 aa11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 FAM110DQ8TAY7 271 aaPredicted RBP11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 FAM103A1Q9BTL3 118 aaKnown RBP11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 ELOVL1Q9BW60 279 aa11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 C21orf62Q9NYP8 219 aa11.65□□□□□ -0.54
ECHDC1-220ENST00000528402 WI2-2373I1.2A0A1W2PRP0 233 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 B4DSR2 109 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 GCGP01275 180 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 S100A8P05109 93 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 MSMBP08118 114 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 PYYP10082 97 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H1EP10412 219 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 EGR2P11161 476 aaPredicted RBP11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 LYZP61626 148 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 RUSC1-AS1Q66K80 236 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 ZNF329Q86UD4 541 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 SLC25A39Q9BZJ4 359 aaPredicted RBP11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 OSTCQ9NRP0 149 aa11.64□□□□□ -0.55
ECHDC1-220ENST00000528402 PEX7O00628 323 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 ISLRO14498 428 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 TRGC2P03986 189 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 GP9P14770 177 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 CENPWQ5EE01 88 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 FAM120AOSQ5T036 256 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 BPIFA4PQ86YQ2 179 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 LYPD1Q8N2G4 141 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 ATP6V0BQ99437 205 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 SHANK2-AS3Q9BTD1 123 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 CHRDL1Q9BU40 450 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
ECHDC1-220ENST00000528402 DOPEY1Q5JWR5 2465 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 TRAV20A0A0B4J274 112 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 NDPQ00604 133 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 C5orf17Q8NAS9 161 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 NECAP1Q8NC96 275 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 RNF125Q96EQ8 232 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 BBC3Q96PG8 261 aaPredicted RBP11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 IL36BQ9NZH7 164 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 MOB4Q9Y3A3 225 aa11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 SMG1Q96Q15 3661 aaKnown RBP11.62□□□□□ -0.55
ECHDC1-220ENST00000528402 IGHV4-30-2A0A087WSY4 118 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 A0A1W2PPQ1 181 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 PGPA6NDG6 321 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 H3BRN7 92 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 RNF224P0DH78 156 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 HOXA5P20719 270 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 ERVFC1-1P60608 527 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 FABP9Q0Z7S8 132 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 COX19Q49B96 90 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 FBLN7Q53RD9 439 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 Q56UQ5 140 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 UNQ5815/PRO19632Q6UWF5 114 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 GSX1Q9H4S2 264 aaPredicted RBP11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 OTORQ9NRC9 128 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 FBXL7Q9UJT9 491 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 KLF12Q9Y4X4 402 aa11.61□□□□□ -0.55
ECHDC1-220ENST00000528402 PGPEP1LA6NFU8 196 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 K7EN84 100 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 M0QZK8 103 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 PRB1P04280 392 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 SLC25A5P05141 298 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 AKR1D1P51857 326 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 CRIP2P52943 208 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 RANP62826 216 aaKnown RBP11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 ZNF600Q6ZNG1 722 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 FAM231DQ6ZW35 169 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 C5orf56Q8N8D9 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 OR4F17Q8NGA8 305 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 IGF2BP2-AS1Q96M15 143 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 TMUB1Q9BVT8 246 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 LRBAP50851 2863 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 TRBV9A0A0B4J1U6 114 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 PHOX2AO14813 284 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BKO60814 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 NDUFB8O95169 186 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 IL4P05112 153 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BJP06899 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BOP23527 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BBP33778 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BDP58876 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BCP62807 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST2H2BEQ16778 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms