RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 TMEM191AQ9H0A3 160 aa8.29□□□□□ -1.08
PDGFRB-207ENST00000520579 TCF19Q9Y242 345 aa8.29□□□□□ -1.08
PDGFRB-207ENST00000520579 LOC400499M0QZD8 3231 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 TTC28Q96AY4 2481 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 TMEM30CPA0ZSE6 113 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 PINLYPA6NC86 204 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 OR5AL1P0C617 328 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 FCER1GP30273 86 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 PLGLB1Q02325 96 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 SLC25A53Q5H9E4 307 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 Q6ZR03 302 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 LCNL1Q6ZST4 164 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 FADS6Q8N9I5 356 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 OR5AN1Q8NGI8 311 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 POLDIP2Q9Y2S7 368 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 AGFG2O95081 481 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 ORM2P19652 201 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 FOXF2Q12947 444 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 ZNF718Q3SXZ3 478 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 TDHQ8IZJ6 230 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 SNRNP40Q96DI7 357 aaKnown RBP8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 C1QTNF5Q9BXJ0 243 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 MUC22E2RYF6 1773 aaPredicted RBP8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 SPTA1P02549 2419 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 A0A1W2PRE2 83 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 LYZL6O75951 148 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 MT-ND6P03923 174 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 CT45A10P0DMU9 189 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 WDR86Q86TI4 376 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 SPEM1Q8N4L4 309 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 SAP30LQ9HAJ7 183 aa8.28□□□□□ -1.08
PDGFRB-207ENST00000520579 REG1BP48304 166 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 SRSF2Q01130 221 aaKnown RBP8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 OSR1Q8TAX0 266 aaPredicted RBP8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 S1PR3Q99500 378 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 H3BRM9 83 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 J3QT63 122 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 APOMO95445 188 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 SLC25A5P05141 298 aaKnown RBP8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 GCSHP23434 173 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 PCOLCEQ15113 449 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 OR10J3Q5JRS4 329 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 MEIG1Q5JSS6 88 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 Q6P435 159 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 MDP1Q86V88 176 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 SPATA25Q9BR10 227 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 RTL8AQ9BWD3 113 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 A0A1W2PQM1 296 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 REG1AP05451 166 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 MAGEA5P43359 124 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 PROK2Q9HC23 129 aa8.27□□□□□ -1.09
PDGFRB-207ENST00000520579 KMT2EQ8IZD2 1858 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A26D6RGX4 464 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 OPRK1P41145 380 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 ZNF497Q6ZNH5 498 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 DEFB127Q9H1M4 99 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 AMMECR1Q9Y4X0 333 aaPredicted RBP8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 TRAV8-1A0A0A6YYK1 113 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 SYS1-DBNDD2H3BUS1 97 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 SRD5A2P31213 254 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 RTL8BQ17RB0 113 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 Q8N7P7 452 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 TMUB1Q9BVT8 246 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 COMMD5Q9GZQ3 224 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 SOX21Q9Y651 276 aaPredicted RBP8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 IZUMO1RA6ND01 250 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 AMTNQ6UX39 209 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 C8orf46Q8TAG6 207 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 MAP1LC3CQ9BXW4 147 aa8.26□□□□□ -1.09
PDGFRB-207ENST00000520579 BOD1L1Q8NFC6 3051 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 C2CD4DB7Z1M9 353 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 K7ERJ3 54 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 GGNQ86UU5 652 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 GRAMD2BQ96HH9 432 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 C18orf15Q96N68 181 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 TNRC18O15417 2968 aaPredicted RBP8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 H3BMG7 143 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 FCGR2BP31994 310 aaPredicted RBP8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 LPAL2Q16609 132 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM169BQ8N8A8 192 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 PTPRSQ13332 1948 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 IGHV1-24A0A0C4DH33 117 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 C2orf70A6NJV1 201 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 GFRA3O60609 400 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 CSN1S1P47710 185 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 ZNRF1Q8ND25 227 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 PRDM14Q9GZV8 571 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 LOXL2Q9Y4K0 774 aa8.25□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A10PA6NDY2 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A18PA6NE21 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A16PA6NEW6 464 aa8.24□□□□□ -1.09
PDGFRB-207ENST00000520579 FAM90A20PA6NIJ5 464 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms