RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 A0A1W2PN81 502 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 MT-ND6P03923 174 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 FAM71F2Q6NXP2 309 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 SPACA3Q8IXA5 215 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 TSKUQ8WUA8 353 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 KCNS1Q96KK3 526 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 POLEQ07864 2286 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 NDUFB3O43676 98 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 BRS3P32247 399 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 LEMD1Q68G75 181 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 C18orf32Q8TCD1 76 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 SAMD10Q9BYL1 202 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 ZNF253O75346 499 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 WDR73Q6P4I2 378 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 MIEN1Q9BRT3 115 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 MLST8Q9BVC4 326 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 KAAG1Q9UBP8 84 aa6.76□□□□□ -1.33
CTNNA1-210ENST00000518825 LYNX1G3V0Z9 82 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 H3BTX0 84 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 M0R143 59 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 LYNX1P0DP58 116 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 ORM2P19652 201 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 KRTDAPP60985 99 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 LRRC10Q5BKY1 277 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 SIGLECL1Q8N7X8 197 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 VSTM2AQ8TAG5 236 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 WIPF2Q8TF74 440 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 URB1-AS1Q96HZ7 61 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 SSBP4Q9BWG4 385 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 OVOL3O00110 214 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 ZNF324O75467 553 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 IGLV1-47P01700 117 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 GP9P14770 177 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 GPR6P46095 362 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 LDLRAD2Q5SZI1 272 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 ZNF705AQ6ZN79 300 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 BLNKQ8WV28 456 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 RNF2Q99496 336 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 TNFRSF19Q9NS68 423 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 EPDR1Q9UM22 224 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 ZNF835Q9Y2P0 537 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 KLF12Q9Y4X4 402 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 A6NNC1 897 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 TEX22C9J3V5 150 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 HLA-DQA1P01909 254 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 APCSP02743 223 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 FAM87AP0C7U9 286 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 C3orf79P0CE67 100 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 PMCHP20382 165 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 CD24P25063 80 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 AMTP48728 403 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 TBR1Q16650 682 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 TMEM183BQ1AE95 376 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 PRR27Q6MZM9 219 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 OR1L4Q8NGR5 311 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 TMEM133Q9H2Q1 129 aa6.75□□□□□ -1.33
CTNNA1-210ENST00000518825 ZNF785A8K8V0 405 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 ENSAO43768 121 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 TMEM116Q8NCL8 245 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 OR1B1Q8NGR6 318 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 GTSF1Q8WW33 167 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 IGFBPL1Q8WX77 278 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 A0A1B0GXF2 115 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 PRRG2O14669 202 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 TNXAQ16473 311 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 SPATA12Q7Z6I5 190 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 GRAMD2BQ96HH9 432 aa6.74□□□□□ -1.33
CTNNA1-210ENST00000518825 IGHV2-26A0A0B4J1V2 119 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 PGPA6NDG6 321 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 PRB4P10163 310 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 FBLN7Q53RD9 439 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 VAMP8Q9BV40 100 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 PRSS22Q9GZN4 317 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 SIGLEC9Q9Y336 463 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 MUC6Q6W4X9 2439 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 MC5RP33032 325 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 VMA21Q3ZAQ7 101 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 Q5PR19 223 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 LCN12Q6JVE5 192 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 TCF24Q7RTU0 167 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 KIR3DL3Q8N743 410 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 TRGV9Q99603 122 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 ALKBH7Q9BT30 221 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 WNT10AQ9GZT5 417 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 IGHV1-69-2A0A0G2JMI3 117 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 NBEAP1P0C6P0 100 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 SUB1P53999 127 aaKnown RBP eCLIP6.73□□□□□ -1.334e-9■■■■■ 35.3
CTNNA1-210ENST00000518825 PRRX1P54821 245 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 EBLN2Q6P2I7 272 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 TEX45Q8NA69 505 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 CLEC7AQ9BXN2 247 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 PPP1R14DQ9NXH3 145 aa6.73□□□□□ -1.33
CTNNA1-210ENST00000518825 IGHV1-3A0A0C4DH29 117 aa6.72□□□□□ -1.33
CTNNA1-210ENST00000518825 C19orf71A6NCJ1 209 aa6.72□□□□□ -1.33
CTNNA1-210ENST00000518825 SIAH2O43255 324 aa6.72□□□□□ -1.33
CTNNA1-210ENST00000518825 LTAP01374 205 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms