RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 PPIBP23284 216 aaKnown RBP-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST1H2BOP23527 126 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST1H2BBP33778 126 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 AP2S1P53680 142 aaPredicted RBP-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST1H2BDP58876 126 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 UBE2KP61086 200 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST1H2BCP62807 126 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 EDDM3AQ14507 147 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST2H2BEQ16778 126 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST2H2BFQ5QNW6 126 aaPredicted RBP-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 C1orf194Q5T5A4 169 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 C5orf46Q6UWT4 87 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 LINC00299Q6ZSB3 139 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 OR5AS1Q8N127 324 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 SYS1Q8N2H4 156 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 UBL4BQ8N7F7 174 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST1H2BHQ93079 126 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 SMIM12Q96EX1 92 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 FAM210AQ96ND0 272 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST1H2BNQ99877 126 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HIST1H2BMQ99879 126 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 CCDC77Q9BR77 488 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 MROQ9BYG7 248 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 HDHD2Q9H0R4 259 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 BCL2L10Q9HD36 194 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 TP73-AS1Q9UF72 201 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 PRO0255Q9UI72 69 aa-2.58□□□□□ -2.82
SCARNA23-201ENST00000516060 A0A1W2PP64 1363 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 DYNC1H1Q14204 4646 aaKnown RBP-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 ATG2AQ2TAZ0 1938 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 LIN7AO14910 233 aaPredicted RBP-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 KCNE1P15382 129 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 BGNP21810 368 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 FXYD3Q14802 87 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 RPL22L1Q6P5R6 122 aaKnown RBP-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 C5orf56Q8N8D9 126 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 GDPD1Q8N9F7 314 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 OR5D14Q8NGL3 314 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 LGALS14Q8TCE9 139 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 TMEM56Q96MV1 263 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 SPRR2FQ96RM1 72 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 PBOV1Q9GZY1 135 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 UBAP1Q9NZ09 502 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 STMN3Q9NZ72 180 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 C15orf41Q9Y2V0 281 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 ARHGEF11O15085 1522 aa-2.59□□□□□ -2.82
SCARNA23-201ENST00000516060 DNAH11Q96DT5 4516 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 AFDNP55196 1824 aaKnown RBP-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 A0A0J9YY99 117 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 C7orf71A4D174 169 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 OR4C45A6NMZ5 311 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 SUPT3HB4E1H0 165 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 M0R2T5 61 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 Q5XG85 94 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 C8orf74Q6P047 294 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 FOXI2Q6ZQN5 318 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 SSX6Q7RTT6 188 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 COMMD1Q8N668 190 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 IFT81Q8WYA0 676 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 CNFNQ9BYD5 112 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 TMEM14BQ9NUH8 114 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 MYH9P35579 1960 aaKnown RBP-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 COL24A1Q17RW2 1714 aa-2.6□□□□□ -2.83
SCARNA23-201ENST00000516060 KIAA0100Q14667 2235 aaKnown RBP-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 SIPA1L2Q9P2F8 1722 aaPredicted RBP-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 TRBV20OR9-2A0A075B6H5 130 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 A0A0J9YY10 115 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 NBDYA0A0U1RRE5 68 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 A0A1B0GX78 115 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 LIMS3P0CW19 117 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 LIMS4P0CW20 117 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 CCL1P22362 96 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 RPS3P23396 243 aaKnown RBP eCLIP-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 PEX19P40855 299 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 VSNL1P62760 191 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 SMAGPQ0VAQ4 97 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 IL18Q14116 193 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 CD200R1LQ6Q8B3 271 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 OR13C4Q8NGS5 318 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 AGR3Q8TD06 166 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 GGACTQ9BVM4 153 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 ERGIC3Q9Y282 383 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 PLCE1Q9P212 2302 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 LRPPRCP42704 1394 aaKnown RBP-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 TMEM94Q12767 1356 aa-2.61□□□□□ -2.83
SCARNA23-201ENST00000516060 LYSTQ99698 3801 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 CDK13Q14004 1512 aaKnown RBP-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 URB1O60287 2271 aaKnown RBP-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 TEX50A0A1B0GTY4 177 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 B4DSR2 109 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 MCRIP1C9JLW8 97 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 GOLGA8MH3BSY2 632 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 WRBO00258 174 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 CCRL2O00421 344 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 DEKP35659 375 aaKnown RBP-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 MAP3K7CLP57077 242 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 BEX3Q00994 111 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 SNCBQ16143 134 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 BATFQ16520 125 aa-2.62□□□□□ -2.83
SCARNA23-201ENST00000516060 CLEC2DQ9UHP7 191 aa-2.62□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms