RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PGPA6NDG6 321 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 APOHP02749 345 aaPredicted RBP13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 LINC00305Q7Z4B0 112 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 ZNF747Q9BV97 191 aa13.78□□□□□ -0.2
SQSTM1-211ENST00000506690 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 HAX1O00165 279 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 SNAI2O43623 268 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 APOA2P02652 100 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 CECR9P0C854 216 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 ACP1P24666 158 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 DPF1Q92782 380 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 FMC1Q96HJ9 113 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 RPH3ALQ9UNE2 315 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 NCOR1O75376 2440 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 COL27A1Q8IZC6 1860 aaPredicted RBP13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 TANC2Q9HCD6 1990 aa13.77□□□□□ -0.21
SQSTM1-211ENST00000506690 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 NPIPB6E9PJ23 425 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 KLRC4-KLRK1H3BQV0 150 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 K7EP34 96 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 TMEM11P17152 192 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 ERHP84090 104 aaKnown RBP13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 NEGR1Q7Z3B1 354 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 THAP8Q8NA92 274 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 STXBP6Q8NFX7 210 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 DYSFO75923 2080 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 TRGV5A0A0B4J1U4 118 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 FAM87AP0C7U9 286 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 CD46P15529 392 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 MDS2Q8NDY4 140 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 NPIPB3Q92617 1050 aa13.76□□□□□ -0.21
SQSTM1-211ENST00000506690 DSCAMO60469 2012 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 OVOL3O00110 214 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 PLAUP00749 431 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 BLNKQ8WV28 456 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 SPRY4Q9C004 299 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 MED13Q9UHV7 2174 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 A6NDN8 102 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 E7EUB6 86 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 NCR2O95944 276 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 C5orf17Q8NAS9 161 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 AP1S3Q96PC3 154 aa13.75□□□□□ -0.21
SQSTM1-211ENST00000506690 HOXC12P31275 282 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 UQCRFS1P47985 274 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 TEX45Q8NA69 505 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 DAZAP1Q96EP5 407 aaKnown RBP13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 AP5S1Q9NUS5 200 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 RABAC1Q9UI14 185 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 BDP1A6H8Y1 2624 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 LHBP01229 141 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 CSN3P07498 182 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 SPRNQ5BIV9 151 aa13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 SLC25A48Q6ZT89 311 aaKnown RBP13.74□□□□□ -0.21
SQSTM1-211ENST00000506690 RBMXL3Q8N7X1 1067 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 PERPQ96FX8 193 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 SPOCK3Q9BQ16 436 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 MRPL36Q9P0J6 103 aaKnown RBP13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 H3BUT2 72 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 TCRAP04437 139 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 ZNF883P0CG24 379 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 CLEC2AQ6UVW9 174 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 LHFPL4Q7Z7J7 247 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 WFDC8Q8IUA0 241 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 OSR1Q8TAX0 266 aaPredicted RBP13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 LINC00574Q9H8X3 128 aa13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 TIMM8BQ9Y5J9 83 aaPredicted RBP13.73□□□□□ -0.21
SQSTM1-211ENST00000506690 IGLV1-44P01699 117 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 IGHV3-48P01763 117 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 WT1-ASQ06250 92 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 GUSBP1Q15486 140 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 C16orf54Q6UWD8 224 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 BOD1L2Q8IYS8 172 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 AHCTF1Q8WYP5 2266 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 A0A0G2JLM5 398 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 CSN1S1P47710 185 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 MOGAT3Q86VF5 341 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 ZCCHC24Q8N2G6 241 aaKnown RBP13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 OR1N2Q8NGR9 330 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 OR2K2Q8NGT1 345 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 OR10AG1Q8NH19 301 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 ZNRD1Q9P1U0 126 aa13.72□□□□□ -0.21
SQSTM1-211ENST00000506690 CGB1A6NKQ9 187 aa13.71□□□□□ -0.21
SQSTM1-211ENST00000506690 KIR3DS1Q14943 382 aa13.71□□□□□ -0.21
SQSTM1-211ENST00000506690 MSMPQ1L6U9 139 aa13.71□□□□□ -0.21
SQSTM1-211ENST00000506690 DUX4L9Q6RFH8 374 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-211ENST00000506690 GATD1Q8NB37 220 aa13.71□□□□□ -0.21
SQSTM1-211ENST00000506690 C1orf162Q8NEQ5 155 aaPredicted RBP13.71□□□□□ -0.21
SQSTM1-211ENST00000506690 COL8A1P27658 744 aa13.71□□□□□ -0.22
SQSTM1-211ENST00000506690 CEACAM3P40198 252 aa13.71□□□□□ -0.22
SQSTM1-211ENST00000506690 OR5AN1Q8NGI8 311 aa13.71□□□□□ -0.22
SQSTM1-211ENST00000506690 FAM222BQ8WU58 562 aa13.71□□□□□ -0.22
SQSTM1-211ENST00000506690 RND1Q92730 232 aa13.71□□□□□ -0.22
SQSTM1-211ENST00000506690 HARBI1Q96MB7 349 aa13.71□□□□□ -0.22
SQSTM1-211ENST00000506690 IGHV1-18A0A0C4DH31 117 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 GP9P14770 177 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 ORM2P19652 201 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 APOBEC3AP31941 199 aaPredicted RBP13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 HSD52Q0P140 79 aa13.7□□□□□ -0.22
SQSTM1-211ENST00000506690 RPUSD1Q9UJJ7 312 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms