RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 LPAL2Q16609 132 aa7.06□□□□□ -1.28
HTT-203ENST00000506137 C22orf39Q6P5X5 142 aa7.06□□□□□ -1.28
HTT-203ENST00000506137 KCNS1Q96KK3 526 aa7.06□□□□□ -1.28
HTT-203ENST00000506137 GPX7Q96SL4 187 aaPredicted RBP7.06□□□□□ -1.28
HTT-203ENST00000506137 PAXXQ9BUH6 204 aa7.06□□□□□ -1.28
HTT-203ENST00000506137 SRXN1Q9BYN0 137 aa7.06□□□□□ -1.28
HTT-203ENST00000506137 ESM1Q9NQ30 184 aa7.06□□□□□ -1.28
HTT-203ENST00000506137 PCTPQ9UKL6 214 aa7.06□□□□□ -1.28
HTT-203ENST00000506137 TRIP12Q14669 1992 aaPredicted RBP7.06□□□□□ -1.28
HTT-203ENST00000506137 A0A087WZ39 114 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 TRAV8-6A0A0B4J262 113 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 A0A0G2JND7 137 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 FAM236AA0A1B0GUQ0 79 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 PGPA6NDG6 321 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 A8MWV9 139 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 EPM2AB3EWF7 344 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 STC2O76061 302 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 WISP2O76076 250 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 ZNF718Q3SXZ3 478 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 BVES-AS1Q5T3Y7 98 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 NPWQ8N729 165 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 OR10P1Q8NGE3 313 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 OR10AG1Q8NH19 301 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 LMX1AQ8TE12 382 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 IGFBPL1Q8WX77 278 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 FGF11Q92914 225 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 VOPP1Q96AW1 172 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 C2orf50Q96LR7 162 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 C2orf48Q96LS8 159 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 MEIS3Q99687 375 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 NTMQ9P121 344 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 RBM12B-AS1Q9P1G2 102 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 RARRES3Q9UL19 164 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 MGAQ8IWI9 3026 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 FBN1P35555 2871 aaKnown RBP7.05□□□□□ -1.28
HTT-203ENST00000506137 CKAP5Q14008 2032 aa7.05□□□□□ -1.28
HTT-203ENST00000506137 NUP210Q8TEM1 1887 aaPredicted RBP7.04□□□□□ -1.28
HTT-203ENST00000506137 BOD1L1Q8NFC6 3051 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 PDZD2O15018 2839 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 TRAV13-1A0A0B4J241 112 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 H3BMG7 143 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 SOCS1O15524 211 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 TYROBPO43914 113 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 SS18L1O75177 396 aaPredicted RBP7.04□□□□□ -1.28
HTT-203ENST00000506137 TRACP01848 142 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 ACVRL1P37023 503 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 CXCL5P42830 114 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 VDAC2P45880 294 aaPredicted RBP7.04□□□□□ -1.28
HTT-203ENST00000506137 SRSF9Q13242 221 aaKnown RBP eCLIP7.04□□□□□ -1.28
HTT-203ENST00000506137 DPPA3Q6W0C5 159 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 FAM57BQ71RH2 274 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 DEFB107AQ8IZN7 70 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 ZCCHC24Q8N2G6 241 aaKnown RBP7.04□□□□□ -1.28
HTT-203ENST00000506137 ZNF709Q8N972 641 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 ZNF564Q8TBZ8 553 aaPredicted RBP7.04□□□□□ -1.28
HTT-203ENST00000506137 DDB2Q92466 427 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 C18orf12Q96KH6 178 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 OR2A5Q96R48 311 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 TNFRSF12AQ9NP84 129 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 C21orf62Q9NYP8 219 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 OR2W1Q9Y3N9 320 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 ANKHD1Q8IWZ3 2542 aaKnown RBP7.04□□□□□ -1.28
HTT-203ENST00000506137 PCNX2A6NKB5 2137 aa7.04□□□□□ -1.28
HTT-203ENST00000506137 MED13LQ71F56 2210 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 IGHV3OR16-9A0A0B4J2B5 98 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 A0A0D9SFI3 127 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 C5orf67F2Z3F1 127 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 SLC25A4P12235 298 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 TPT1P13693 172 aaKnown RBP7.03□□□□□ -1.28
HTT-203ENST00000506137 PSMB3P49720 205 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 SPANXN4Q5MJ08 99 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 C11orf87Q6NUJ2 197 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 ZNF322Q6U7Q0 402 aaPredicted RBP7.03□□□□□ -1.28
HTT-203ENST00000506137 VN1R4Q7Z5H5 301 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 LINC00471Q8N535 108 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 ZNF555Q8NEP9 628 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 PRSS27Q9BQR3 290 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 OTORQ9NRC9 128 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 U3KQE9 123 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 ICE1Q9Y2F5 2266 aa7.03□□□□□ -1.28
HTT-203ENST00000506137 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
HTT-203ENST00000506137 MYH8P13535 1937 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 IGHV1-58A0A0C4DH39 117 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 A0A1W2PPM0 123 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 SSSCA1O60232 199 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 IL5P05113 134 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 SLC25A5P05141 298 aaKnown RBP7.02□□□□□ -1.29
HTT-203ENST00000506137 CR2P20023 1033 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 GFERP55789 205 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 EBI3Q14213 229 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 PYDC2Q56P42 97 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 ATP1A1-AS1Q5TC04 95 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 C1orf140Q5VVS0 124 aa7.02□□□□□ -1.29
HTT-203ENST00000506137 H2AFVQ71UI9 128 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms