RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PNKDQ8N490 385 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 KIR3DL3Q8N743 410 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 ZIC4Q8N9L1 334 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 OR9G4Q8NGQ1 327 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 OR1B1Q8NGR6 318 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 OR5B3Q8NH48 314 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 VN1R17PQ8TDU5 208 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 C22orf15Q8WYQ4 148 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 RDH5Q92781 318 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 C11orf52Q96A22 123 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 STARD4Q96DR4 205 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 ZNF479Q96JC4 524 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 KCNS1Q96KK3 526 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 GNB1LQ9BYB4 327 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 SRXN1Q9BYN0 137 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 CLN8Q9UBY8 286 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 FBN3Q75N90 2809 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 TMEM131Q92545 1883 aa3.3□□□□□ -1.88
RFC1-208ENST00000504849 MYO9AB2RTY4 2548 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 LRP4O75096 1905 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 IGHV4-4A0A075B6R2 117 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 TRGV10A0A0A0MS01 117 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 A0A1W2PR80 420 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 C15orf61A6NNL5 157 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 PRAC2D3DTV9 90 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 SIRPB1O00241 398 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 CDIPTO14735 213 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 LINC01565O15544 149 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 TCF21O43680 179 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 CXCL13O43927 109 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 YPEL1O60688 119 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 SERF1AO75920 110 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 IGKV1D-33P01593 117 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 IGKV1-33P01594 117 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 IGKV1-39P01597 117 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 HLA-DQA1P01909 254 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 CRYAAP02489 173 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 IGKV1D-39P04432 117 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 SELEP16581 610 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 CCNOP22674 350 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 KIR2DS2P43631 304 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 UBE2G2P60604 165 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 RPS20P60866 119 aaKnown RBP3.29□□□□□ -1.88
RFC1-208ENST00000504849 RHOBP62745 196 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 TFF3Q07654 80 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 SLAQ13239 276 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 TIGITQ495A1 244 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 LINC00242Q5T6M2 205 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 C9orf135Q5VTT2 229 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 FBXW9Q5XUX1 488 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 STUMQ69YW2 141 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 CYB5R2Q6BCY4 276 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 PVRIGQ6DKI7 326 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 RASL11AQ6T310 242 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 ADAMTSL5Q6ZMM2 481 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 ZNF497Q6ZNH5 498 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 LRP11Q86VZ4 500 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 C1orf174Q8IYL3 243 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 TMEM256Q8N2U0 113 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 ZNF738Q8NE65 137 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 OR13A1Q8NGR1 328 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 GALMQ96C23 342 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 YPEL2Q96QA6 119 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 HSD17B10Q99714 261 aaKnown RBP3.29□□□□□ -1.88
RFC1-208ENST00000504849 SFXN3Q9BWM7 321 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 ENY2Q9NPA8 101 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 TMEM167BQ9NRX6 74 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 THYN1Q9P016 225 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 OR1A1Q9P1Q5 309 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 B4GALT7Q9UBV7 327 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 MRPS16Q9Y3D3 137 aaKnown RBP3.29□□□□□ -1.88
RFC1-208ENST00000504849 ITPR1Q14643 2758 aa3.29□□□□□ -1.88
RFC1-208ENST00000504849 SNRNP200O75643 2136 aaKnown RBP3.29□□□□□ -1.88
RFC1-208ENST00000504849 KIF26BQ2KJY2 2108 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 IGKV3D-15A0A087WSY6 115 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 A0A087WYN8 130 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 IGHV1-45A0A0A0MS14 117 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 ODAMA1E959 279 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 GRIFINA4D1Z8 144 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 C5orf49A4QMS7 147 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 K7EP13 123 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 K7EQD1 137 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 SYNGR1O43759 233 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 TRAPPC6AO75865 159 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 S1PR2O95136 353 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 GPX1P07203 203 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 OR10J4P0C629 311 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 P0C879 139 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 PATE4P0C8F1 98 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 CCL3P10147 92 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 GATA1P15976 413 aaPredicted RBP3.28□□□□□ -1.88
RFC1-208ENST00000504849 PMCHP20382 165 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 CBLN1P23435 193 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 G6PCP35575 357 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 GABRA2P47869 451 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 ATP5G3P48201 142 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 GNG4P50150 75 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 LHX2P50458 406 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 RIPPLY3P57055 190 aa3.28□□□□□ -1.88
RFC1-208ENST00000504849 MLF1P58340 268 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms