RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 C19orf35Q6ZS72 473 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 TNFRSF19Q9NS68 423 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 SERTAD4Q9NUC0 356 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 PEX7O00628 323 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 MT-ND6P03923 174 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 PRRX1P54821 245 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 SLC35B1P78383 322 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 BAGE3Q86Y29 109 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 BAGE2Q86Y30 109 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 NAT8BQ9UHF3 227 aa11.95□□□□□ -0.5
UBXN11-216ENST00000496466 RPLP1P05386 114 aaKnown RBP11.94□□□□□ -0.5
UBXN11-216ENST00000496466 POLR3KQ9Y2Y1 108 aaPredicted RBP11.94□□□□□ -0.5
UBXN11-216ENST00000496466 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 TRAV34A0A0B4J273 112 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 IGHV1-3A0A0C4DH29 117 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 APELAP0DMC3 54 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 ORM2P19652 201 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 MYCNOSP40205 109 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 RANP62826 216 aaKnown RBP11.94□□□□□ -0.5
UBXN11-216ENST00000496466 LY6DQ14210 128 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 COX19Q49B96 90 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 Q6ZWC4 215 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 FAM168AQ92567 244 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 PERPQ96FX8 193 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 TRGV9Q99603 122 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 INSIG2Q9Y5U4 225 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 COL6A6A6NMZ7 2263 aa11.94□□□□□ -0.5
UBXN11-216ENST00000496466 CHD8Q9HCK8 2581 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 LRBAP50851 2863 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 BUB1B-PAK6H3BSN5 160 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 CA1P00915 261 aaPredicted RBP11.93□□□□□ -0.5
UBXN11-216ENST00000496466 AMY1AP04745 511 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 COMPP49747 757 aaPredicted RBP11.93□□□□□ -0.5
UBXN11-216ENST00000496466 ASPHD1Q5U4P2 390 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 MRPL54Q6P161 138 aaKnown RBP11.93□□□□□ -0.5
UBXN11-216ENST00000496466 OR1B1Q8NGR6 318 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 CLEC7AQ9BXN2 247 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 GNB4Q9HAV0 340 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 IGHV3-21A0A0B4J1V1 117 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 IZUMO1RA6ND01 250 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 CD33P20138 364 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 LHFPL4Q7Z7J7 247 aa11.93□□□□□ -0.5
UBXN11-216ENST00000496466 GNG5P63218 68 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 KIAA1644Q3SXP7 199 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 FAM231DQ6ZW35 169 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 TMEM116Q8NCL8 245 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 MBD6Q96DN6 1003 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 SSBP3Q9BWW4 388 aaPredicted RBP11.92□□□□□ -0.5
UBXN11-216ENST00000496466 ZNF705FA8MVS1 300 aaPredicted RBP11.92□□□□□ -0.5
UBXN11-216ENST00000496466 NPSP0C0P6 89 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 ZNF705DP0CH99 300 aaPredicted RBP11.92□□□□□ -0.5
UBXN11-216ENST00000496466 ZNF705BP0CI00 300 aaPredicted RBP11.92□□□□□ -0.5
UBXN11-216ENST00000496466 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 C22orf15Q8WYQ4 148 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 TBX15Q96SF7 602 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 HSPB9Q9BQS6 159 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 NCOR2Q9Y618 2525 aa11.92□□□□□ -0.5
UBXN11-216ENST00000496466 PPIAL4CA0A0B4J2A2 164 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 TEX22C9J3V5 150 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 PPIAL4GP0DN37 164 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 COX7A1P24310 79 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 PPP1R27Q86WC6 154 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 NUDT10Q8NFP7 164 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 BLNKQ8WV28 456 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 EPDR1Q9UM22 224 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 DCHS2Q6V1P9 2916 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 HLA-DQA1P01909 254 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 PAX2Q02962 417 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 TMEM183BQ1AE95 376 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 OR10J3Q5JRS4 329 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 GRAMD2BQ96HH9 432 aa11.91□□□□□ -0.5
UBXN11-216ENST00000496466 F11RQ9Y624 299 aaKnown RBP11.91□□□□□ -0.5
UBXN11-216ENST00000496466 CORTO00230 105 aa11.9□□□□□ -0.5
UBXN11-216ENST00000496466 BMPR1BO00238 502 aa11.9□□□□□ -0.5
UBXN11-216ENST00000496466 HYPMO75409 117 aa11.9□□□□□ -0.5
UBXN11-216ENST00000496466 SLC25A5P05141 298 aaKnown RBP11.9□□□□□ -0.5
UBXN11-216ENST00000496466 SAMD10Q9BYL1 202 aa11.9□□□□□ -0.5
UBXN11-216ENST00000496466 FBXL15Q9H469 300 aa11.9□□□□□ -0.5
UBXN11-216ENST00000496466 PGPA6NDG6 321 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 RBP4P02753 201 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 NBEAP1P0C6P0 100 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 RPEQ96AT9 228 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 RAB1BQ9H0U4 201 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
UBXN11-216ENST00000496466 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 LY6LH3BQJ8 138 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 BRS3P32247 399 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 PLP1P60201 277 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 TPTE2P1Q5T6R2 138 aa11.89□□□□□ -0.51
UBXN11-216ENST00000496466 ZNF331Q9NQX6 463 aaPredicted RBP11.89□□□□□ -0.51
UBXN11-216ENST00000496466 APCSP02743 223 aa11.88□□□□□ -0.51
UBXN11-216ENST00000496466 GPX1P07203 203 aa11.88□□□□□ -0.51
UBXN11-216ENST00000496466 GP9P14770 177 aa11.88□□□□□ -0.51
UBXN11-216ENST00000496466 SRIP30626 198 aa11.88□□□□□ -0.51
UBXN11-216ENST00000496466 CDKN1AP38936 164 aa11.88□□□□□ -0.51
UBXN11-216ENST00000496466 UBE2G1P62253 170 aa11.88□□□□□ -0.51
UBXN11-216ENST00000496466 PRR27Q6MZM9 219 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms