RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SAP30O75446 220 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 SNAPC5O75971 98 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 ATG12O94817 140 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 IFNA21P01568 189 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 IGKV1-5P01602 117 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 IGLV2-23P01705 113 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 CSN3P07498 182 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 RAB9AP51151 201 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 AKR1C2P52895 323 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 ERVK-16P61578 105 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 SRPXP78539 464 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 RUNX1Q01196 453 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 PLGLAQ15195 96 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 PSG5Q15238 335 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 FCN2Q15485 313 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 SLC35G3Q8N808 338 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 OR8H1Q8NGG4 311 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 OR10C1Q96KK4 312 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 TSNAXQ99598 290 aaKnown RBP4.84□□□□□ -1.63
VIM-207ENST00000495528 RNF5Q99942 180 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 TM2D3Q9BRN9 247 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 Q9H8V8 135 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 GSKIPQ9P0R6 139 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 METTL1Q9UBP6 276 aaKnown RBP4.84□□□□□ -1.63
VIM-207ENST00000495528 SHPKQ9UHJ6 478 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 NSG2Q9Y328 171 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 MSGN1A6NI15 193 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 MPTX1A8MV57 137 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 UPK2O00526 184 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 GOSR2O14653 212 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 NBR2O15453 112 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 OR2A4O95047 310 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 CRYGBP07316 175 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 OR9G9P0C7N8 305 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 CXCL3P19876 107 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 UBE2KP61086 200 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 RRAS2P62070 204 aaPredicted RBP4.83□□□□□ -1.64
VIM-207ENST00000495528 PJVKQ0ZLH3 352 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 MMDQ15546 238 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 VMA21Q3ZAQ7 101 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 OR4A47Q6IF82 309 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 PUSL1Q8N0Z8 303 aaKnown RBP4.83□□□□□ -1.64
VIM-207ENST00000495528 LRTM2Q8N967 370 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 NPBQ8NG41 125 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 OR11H7Q8NGC8 314 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 OR4A16Q8NH70 328 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 OR1S1Q8NH92 325 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 ARPC1AQ92747 370 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 IL22RA2Q969J5 263 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 LSM10Q969L4 123 aaKnown RBP4.83□□□□□ -1.64
VIM-207ENST00000495528 OR2A7Q96R45 310 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 DNAJC4Q9NNZ3 241 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.83□□□□□ -1.64
VIM-207ENST00000495528 COMMD9Q9P000 198 aa4.83□□□□□ -1.64
VIM-207ENST00000495528 IGHV7-81A0A0B4J1V7 117 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 TRAV41A0A0B4J266 112 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 TEX50A0A1B0GTY4 177 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 A0A1B0GU03 582 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 LINC01619G3V211 115 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 SOX15O60248 233 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 KBTBD11O94819 623 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 CNIH1O95406 144 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 SAA1P0DJI8 122 aaPredicted RBP4.82□□□□□ -1.64
VIM-207ENST00000495528 SULT1A3P0DMM9 295 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 SULT1A4P0DMN0 295 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 HLA-GP17693 338 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 BCAP31P51572 246 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 SMCO1Q147U7 214 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 POU2AF1Q16633 256 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 C5orf64Q2M2E5 130 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 IAH1Q2TAA2 248 aaPredicted RBP4.82□□□□□ -1.64
VIM-207ENST00000495528 THOC7Q6I9Y2 204 aaKnown RBP4.82□□□□□ -1.64
VIM-207ENST00000495528 PPP1R27Q86WC6 154 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 TMEM167AQ8TBQ9 72 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 C2orf50Q96LR7 162 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 PDCD10Q9BUL8 212 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 HINT2Q9BX68 163 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 ZNF430Q9H8G1 570 aaPredicted RBP4.82□□□□□ -1.64
VIM-207ENST00000495528 PARP11Q9NR21 331 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 BET1LQ9NYM9 111 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 FBXO7Q9Y3I1 522 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
VIM-207ENST00000495528 CSMD3Q7Z407 3707 aa4.82□□□□□ -1.64
VIM-207ENST00000495528 TNCP24821 2201 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 PIGBOS1A0A0B4J2F0 54 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 DUXBA0A1W2PPF3 345 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 E7EUB6 86 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 ST8SIA3O43173 380 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 CDK2AP2O75956 126 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 NDUFA3O95167 84 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 CA2P00918 260 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 IFNA17P01571 189 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 HLA-DRB1P01911 266 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 P0C879 139 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 APELAP0DMC3 54 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 H2BFSP57053 126 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 OR2B8PP59922 312 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 HSPE1P61604 102 aaKnown RBP4.81□□□□□ -1.64
VIM-207ENST00000495528 RPL8P62917 257 aaKnown RBP4.81□□□□□ -1.64
VIM-207ENST00000495528 NDPQ00604 133 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms