RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
CALD1-222ENST00000495522 A0A1B0GUS0 222 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 SNURFLB1AK76 121 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 CDSNQ15517 529 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 TIMD4Q96H15 378 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 NCOR2Q9Y618 2525 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 GRIFINA4D1Z8 144 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 HYPMO75409 117 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 COX19Q49B96 90 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 WDR73Q6P4I2 378 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 SRSF12Q8WXF0 261 aaKnown RBP12.25□□□□□ -0.45
CALD1-222ENST00000495522 LINC00479Q96M42 142 aa12.25□□□□□ -0.45
CALD1-222ENST00000495522 IGHV3-21A0A0B4J1V1 117 aa12.24□□□□□ -0.45
CALD1-222ENST00000495522 MT-ND6P03923 174 aa12.24□□□□□ -0.45
CALD1-222ENST00000495522 CRISP2P16562 243 aa12.24□□□□□ -0.45
CALD1-222ENST00000495522 MYCNOSP40205 109 aa12.24□□□□□ -0.45
CALD1-222ENST00000495522 PLGLAQ15195 96 aa12.24□□□□□ -0.45
CALD1-222ENST00000495522 SNHG12Q9BXW3 62 aa12.24□□□□□ -0.45
CALD1-222ENST00000495522 CBLN4Q9NTU7 201 aa12.24□□□□□ -0.45
CALD1-222ENST00000495522 CHTOPQ9Y3Y2 248 aaKnown RBP12.24□□□□□ -0.45
CALD1-222ENST00000495522 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 ZNF705GA8MUZ8 300 aaPredicted RBP12.23□□□□□ -0.45
CALD1-222ENST00000495522 PLP1P60201 277 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 TPTE2P1Q5T6R2 138 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 BAGE2Q86Y30 109 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 NHLRC2Q8NBF2 726 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 CMTM2Q8TAZ6 248 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 ATG101Q9BSB4 218 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 SERTAD4Q9NUC0 356 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 TIMM23O14925 209 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 NUPR1O60356 82 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 LY6HO94772 140 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 FRMD6-AS1P0C7T7 363 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 RANP62826 216 aaKnown RBP12.23□□□□□ -0.45
CALD1-222ENST00000495522 ZNF664Q8N3J9 261 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 SRSF8Q9BRL6 282 aaKnown RBP12.23□□□□□ -0.45
CALD1-222ENST00000495522 CACNA1AO00555 2505 aa12.23□□□□□ -0.45
CALD1-222ENST00000495522 HTR1DP28221 377 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 TCL1AP56279 114 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 OR11H6Q8NGC7 330 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 BLNKQ8WV28 456 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 SPINK4O60575 86 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 LDLRAD2Q5SZI1 272 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 DPM3Q9P2X0 92 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 NAT8BQ9UHF3 227 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 EPDR1Q9UM22 224 aa12.22□□□□□ -0.45
CALD1-222ENST00000495522 SPTA1P02549 2419 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 SLC25A5P05141 298 aaKnown RBP12.21□□□□□ -0.45
CALD1-222ENST00000495522 RPLP1P05386 114 aaKnown RBP12.21□□□□□ -0.45
CALD1-222ENST00000495522 NBEAP1P0C6P0 100 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 ESDP10768 282 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 TMEM11P17152 192 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 ARF6P62330 175 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 Q0VG73 95 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 MMDQ15546 238 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 TMEM183BQ1AE95 376 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 C11orf71Q6IPW1 123 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 TMEM136Q6ZRR5 245 aa12.21□□□□□ -0.45
CALD1-222ENST00000495522 NEU4Q8WWR8 484 aaPredicted RBP12.21□□□□□ -0.45
CALD1-222ENST00000495522 LRBAP50851 2863 aa12.21□□□□□ -0.46
CALD1-222ENST00000495522 IZUMO1RA6ND01 250 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 PGPA6NDG6 321 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 I3L2K1 104 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 M0R1W7 72 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 CNIH1O95406 144 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 AMY1AP04745 511 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 NPSP0C0P6 89 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 GP9P14770 177 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 TPPP2P59282 170 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 UBE2G1P62253 170 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 GNG5P63218 68 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 PAFAH1B2P68402 229 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 MS4A10Q96PG2 267 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 HIGD1AQ9Y241 93 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 IGLC1P0CG04 106 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 CEACAM3P40198 252 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 SLC35B1P78383 322 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 BAGE3Q86Y29 109 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 SSBP3Q9BWW4 388 aaPredicted RBP12.2□□□□□ -0.46
CALD1-222ENST00000495522 WNT10AQ9GZT5 417 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 GSX1Q9H4S2 264 aaPredicted RBP12.2□□□□□ -0.46
CALD1-222ENST00000495522 CHD8Q9HCK8 2581 aa12.2□□□□□ -0.46
CALD1-222ENST00000495522 LOC105371242A0A075B767 164 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 NBR2O15453 112 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 SERF1AO75920 110 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 LINC00310P59036 64 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 MRPL54Q6P161 138 aaKnown RBP12.19□□□□□ -0.46
CALD1-222ENST00000495522 LHFPL4Q7Z7J7 247 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 MBD6Q96DN6 1003 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 SMIM12Q96EX1 92 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 CHRDL1Q9BU40 450 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 HILPDAQ9Y5L2 63 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 SCGB1D1O95968 90 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 CA1P00915 261 aaPredicted RBP12.19□□□□□ -0.46
CALD1-222ENST00000495522 HLA-DQA1P01909 254 aa12.19□□□□□ -0.46
CALD1-222ENST00000495522 PSG1P11464 419 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms