RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 OR2C1O95371 312 aa12.86□□□□□ -0.35
CBX4-204ENST00000495122 MFAP2P55001 183 aa12.86□□□□□ -0.35
CBX4-204ENST00000495122 C10orf113Q5VZT2 155 aa12.86□□□□□ -0.35
CBX4-204ENST00000495122 ARPC1AQ92747 370 aa12.86□□□□□ -0.35
CBX4-204ENST00000495122 RPUSD4Q96CM3 377 aaKnown RBP12.86□□□□□ -0.35
CBX4-204ENST00000495122 TMEM68Q96MH6 324 aa12.86□□□□□ -0.35
CBX4-204ENST00000495122 SSX3Q99909 188 aa12.86□□□□□ -0.35
CBX4-204ENST00000495122 C20orf24Q9BUV8 137 aa12.86□□□□□ -0.35
CBX4-204ENST00000495122 NBEAL1Q6ZS30 2694 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 A0A1W2PRE2 83 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 I3L2K1 104 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 SCGB2A1O75556 95 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 AVPP01185 164 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 REG1AP05451 166 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 SAA4P35542 130 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 MLANAQ16655 118 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 KLK9Q2XQG4 91 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 AKIRIN2Q53H80 203 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 CST9LP1Q5W188 147 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 S100A7AQ86SG5 101 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 TTC9CQ8N5M4 171 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.85□□□□□ -0.35
CBX4-204ENST00000495122 HIST1H2BAQ96A08 127 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 WNT10AQ9GZT5 417 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 THYN1Q9P016 225 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 KLK9Q9UKQ9 250 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 LY96Q9Y6Y9 160 aa12.85□□□□□ -0.35
CBX4-204ENST00000495122 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
CBX4-204ENST00000495122 CLDN34H7C241 214 aa12.84□□□□□ -0.35
CBX4-204ENST00000495122 TGOLN2O43493 480 aa12.84□□□□□ -0.35
CBX4-204ENST00000495122 DEFA4P12838 97 aa12.84□□□□□ -0.35
CBX4-204ENST00000495122 HIST1H1BP16401 226 aaKnown RBP12.84□□□□□ -0.35
CBX4-204ENST00000495122 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
CBX4-204ENST00000495122 DYNAPQ8N1N2 210 aa12.84□□□□□ -0.35
CBX4-204ENST00000495122 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
CBX4-204ENST00000495122 AJUBAQ96IF1 538 aa12.84□□□□□ -0.35
CBX4-204ENST00000495122 IGHV1-69DA0A0B4J2H0 117 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 LOC105371267A0A1B0GV96 52 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 J3QLI3 93 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 IGHV1-69P01742 117 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 CX3CL1P78423 397 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 SPATA31B1PQ5VZV4 182 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 TEX29Q8N6K0 151 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 TMEM37Q8WXS4 190 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 YPEL4Q96NS1 127 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 MLXQ9UH92 298 aa12.83□□□□□ -0.36
CBX4-204ENST00000495122 CENPVL3A0A0U1RRI6 287 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 A0A1W2PRD5 423 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 A0A1W2PRF3 423 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 A0A1W2PRM7 423 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 NCBP2LA6PVI3 153 aaKnown RBP12.82□□□□□ -0.36
CBX4-204ENST00000495122 C9JCJ5 164 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 PPP1R2P9O14990 202 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 OR7C2O60412 319 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 RASL11BQ9BPW5 248 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 RNF24Q9Y225 148 aa12.82□□□□□ -0.36
CBX4-204ENST00000495122 IGLV11-55A0A075B6I3 123 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 HAX1O00165 279 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 HYPMO75409 117 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 EIF3GO75821 320 aaKnown RBP eCLIP12.81□□□□□ -0.36
CBX4-204ENST00000495122 FSHBP01225 129 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 IGLC1P0CG04 106 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 RAB5AP20339 215 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 AKR1C3P42330 323 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 ATP5G3P48201 142 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 UBE2G2P60604 165 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 RAB5BP61020 215 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 RPL23P62829 140 aaKnown RBP12.81□□□□□ -0.36
CBX4-204ENST00000495122 ZNF674Q2M3X9 581 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 C1QL4Q86Z23 238 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 Q8N9W7 124 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 ZNF418Q8TF45 676 aaPredicted RBP12.81□□□□□ -0.36
CBX4-204ENST00000495122 BTF3L4Q96K17 158 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 TXN2Q99757 166 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 MEGF9Q9H1U4 602 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 MRPL36Q9P0J6 103 aaKnown RBP12.81□□□□□ -0.36
CBX4-204ENST00000495122 YTHDF2Q9Y5A9 579 aaKnown RBP12.81□□□□□ -0.36
CBX4-204ENST00000495122 DMRT1Q9Y5R6 373 aa12.81□□□□□ -0.36
CBX4-204ENST00000495122 C1orf196B1AJZ1 125 aa12.8□□□□□ -0.36
CBX4-204ENST00000495122 K7EIM0 57 aa12.8□□□□□ -0.36
CBX4-204ENST00000495122 GATA2P23769 480 aaPredicted RBP12.8□□□□□ -0.36
CBX4-204ENST00000495122 FCGR2BP31994 310 aaPredicted RBP12.8□□□□□ -0.36
CBX4-204ENST00000495122 HILS1P60008 231 aa12.8□□□□□ -0.36
CBX4-204ENST00000495122 ZNF90Q03938 601 aa12.8□□□□□ -0.36
CBX4-204ENST00000495122 ADIRFQ15847 76 aa12.8□□□□□ -0.36
CBX4-204ENST00000495122 OR5AU1Q8NGC0 362 aa12.8□□□□□ -0.36
CBX4-204ENST00000495122 OR51G1Q8NGK1 321 aa12.8□□□□□ -0.36
CBX4-204ENST00000495122 SLC25A2Q9BXI2 301 aa12.8□□□□□ -0.36
CBX4-204ENST00000495122 CRYBA1P05813 215 aa12.79□□□□□ -0.36
CBX4-204ENST00000495122 S100A7P31151 101 aa12.79□□□□□ -0.36
CBX4-204ENST00000495122 MFAP4P55083 255 aa12.79□□□□□ -0.36
CBX4-204ENST00000495122 YPEL3P61236 119 aaPredicted RBP12.79□□□□□ -0.36
CBX4-204ENST00000495122 UBE2L3P68036 154 aaKnown RBP12.79□□□□□ -0.36
CBX4-204ENST00000495122 PATE2Q6UY27 113 aa12.79□□□□□ -0.36
CBX4-204ENST00000495122 SGMS2Q8NHU3 365 aa12.79□□□□□ -0.36
CBX4-204ENST00000495122 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
CBX4-204ENST00000495122 ZNF503Q96F45 646 aa12.79□□□□□ -0.36
CBX4-204ENST00000495122 PAXXQ9BUH6 204 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms