RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ATP6V0E2Q8NHE4 81 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 PATE1Q8WXA2 126 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 PGLYRP4Q96LB8 373 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 CHCHD5Q9BSY4 110 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 LY96Q9Y6Y9 160 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 IGKV1D-43A0A0B4J1Z2 117 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 FXYD7P58549 80 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 RPL30P62888 115 aaKnown RBP5.61□□□□□ -1.51
VPS13B-205ENST00000493587 RSPO4Q2I0M5 234 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-205ENST00000493587 RRN3P1Q2M238 152 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 BCORP1Q8N888 145 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 OR1L4Q8NGR5 311 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 UBALD1Q8TB05 177 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 PIGCQ92535 297 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 URB1-AS1Q96HZ7 61 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 PRADC1Q9BSG0 188 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 PKIGQ9Y2B9 76 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 AGRNO00468 2067 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 IGHV1OR15-9A0A0B4J2B8 117 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 SPTY2D1-AS1A0A0U1RR47 76 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 A0A1W2PR77 199 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 SRD5A1P18405 259 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 Q6ZQT7 251 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 TEN1Q86WV5 123 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 ZNF524Q96C55 264 aa5.61□□□□□ -1.51
VPS13B-205ENST00000493587 PRRG2O14669 202 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 LTAP01374 205 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 MYOD1P15172 320 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 COL8A1P27658 744 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 DSCR4P56555 118 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-205ENST00000493587 HRCT1Q6UXD1 115 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 TMEM14EPQ6UXP3 125 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 Q6ZR03 302 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 RBPMS2Q6ZRY4 209 aaKnown RBP5.6□□□□□ -1.51
VPS13B-205ENST00000493587 CEND1Q8N111 149 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 C15orf53Q8NAA6 179 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 OR13A1Q8NGR1 328 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 ZNF747Q9BV97 191 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 C21orf62Q9NYP8 219 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 EPDR1Q9UM22 224 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 SEC16AO15027 2179 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 OOSP1A8MZH6 123 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 H0YIG0 161 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 TBC1D28Q2M2D7 210 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 CIARTQ8N365 385 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-205ENST00000493587 SNRNP40Q96DI7 357 aaKnown RBP5.6□□□□□ -1.51
VPS13B-205ENST00000493587 NABP2Q9BQ15 211 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 MSRB2Q9Y3D2 182 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 INTS1Q8N201 2190 aaKnown RBP5.6□□□□□ -1.51
VPS13B-205ENST00000493587 TRIOBPQ9H2D6 2365 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 TMED7-TICAM2A0A0A6YYA0 188 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 FAM90A26D6RGX4 464 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 TNFSF11O14788 317 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 SEC61GP60059 68 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 LYRM7Q5U5X0 104 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 LINC00479Q96M42 142 aa5.6□□□□□ -1.51
VPS13B-205ENST00000493587 MRPS17Q9Y2R5 130 aaKnown RBP5.6□□□□□ -1.51
VPS13B-205ENST00000493587 A0A1W2PPC4 97 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 F8WDY8 70 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 CRLF1O75462 422 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 DHRS3O75911 302 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 ATP5LO75964 103 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 OR2J3O76001 311 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 THBDP07204 575 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 TMEM211Q6ICI0 200 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 SLC25A47Q6Q0C1 308 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 SIGLEC15Q6ZMC9 328 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 DOCK7Q96N67 2140 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 WDR87Q6ZQQ6 2873 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 ASPMQ8IZT6 3477 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 IGKV1-5P01602 117 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 PRSS1P07477 247 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 HERVK_113P63121 156 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 TMEM155Q4W5P6 130 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 PCSK4Q6UW60 755 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 DTX1Q86Y01 620 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 FGFRL1Q8N441 504 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 CDX2Q99626 313 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-205ENST00000493587 PRDM6Q9NQX0 595 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 IDI2-AS1Q9NZ38 188 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 PRO0461Q9UI25 63 aa5.59□□□□□ -1.51
VPS13B-205ENST00000493587 KLK5Q9Y337 293 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-205ENST00000493587 C17orf51A8MQB3 221 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 H3BML4 177 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 HOXA3O43365 443 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-205ENST00000493587 IGLC6P0CF74 106 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 MYF5P13349 255 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 EDN2P20800 178 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 UCNP55089 124 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 SPATA46Q5T0L3 261 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 TMEM101Q96IK0 257 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 STARD5Q9NSY2 213 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 SIGLEC9Q9Y336 463 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 K7ESF4 209 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 IGFBP4P22692 258 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 ZNF718Q3SXZ3 478 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 CFAP126Q5VTH2 177 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 RND1Q92730 232 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 DLL3Q9NYJ7 618 aa5.58□□□□□ -1.52
VPS13B-205ENST00000493587 ZNF256Q9Y2P7 627 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms