RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 U3KQE9 123 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 F5H768 121 aa8.4□□□□□ -1.06
GPNMB-214ENST00000492858 CLN5O75503 358 aa8.4□□□□□ -1.06
GPNMB-214ENST00000492858 SNCAP37840 140 aa8.4□□□□□ -1.06
GPNMB-214ENST00000492858 NKX2-1P43699 371 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-214ENST00000492858 HOXA1P49639 335 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-214ENST00000492858 HSPE1P61604 102 aaKnown RBP8.4□□□□□ -1.06
GPNMB-214ENST00000492858 CLINT1Q14677 625 aa8.4□□□□□ -1.06
GPNMB-214ENST00000492858 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
GPNMB-214ENST00000492858 OR52I2Q8NH67 350 aa8.4□□□□□ -1.06
GPNMB-214ENST00000492858 DEDD2Q8WXF8 326 aa8.4□□□□□ -1.06
GPNMB-214ENST00000492858 SLC35B3Q9H1N7 401 aa8.4□□□□□ -1.06
GPNMB-214ENST00000492858 SCGB2A1O75556 95 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 IGKV1-17P01599 117 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-214ENST00000492858 HNRNPCP07910 306 aaKnown RBP eCLIP8.39□□□□□ -1.07
GPNMB-214ENST00000492858 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 RCVRNP35243 200 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 TIGITQ495A1 244 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 SPANXN2Q5MJ10 180 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 DHRS11Q6UWP2 260 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 H2BFWTQ7Z2G1 175 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 SNX29P2Q8IUI4 249 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 OR4B1Q8NGF8 309 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 S100ZQ8WXG8 99 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 Q9H3A6 140 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 KLK11Q9UBX7 282 aa8.39□□□□□ -1.07
GPNMB-214ENST00000492858 ANKRD20A5PA0PJZ0 165 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 TBPP20226 339 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 OPRK1P41145 380 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 IL18Q14116 193 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 USF2Q15853 346 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-214ENST00000492858 BAK1Q16611 211 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 MLANAQ16655 118 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 SIGLEC15Q6ZMC9 328 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 CMTM1Q8IZ96 169 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 TMEM229BQ8NBD8 167 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 OR5AP2Q8NGF4 316 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 OR4X1Q8NH49 305 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 SEC22AQ96IW7 307 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 C17orf77Q96MU5 243 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 LINC00052Q96N35 136 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 MAGT1Q9H0U3 335 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 SAV1Q9H4B6 383 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-214ENST00000492858 FNDC4Q9H6D8 234 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-214ENST00000492858 EHFQ9NZC4 300 aa8.38□□□□□ -1.07
GPNMB-214ENST00000492858 LYRM9A8MSI8 78 aa8.37□□□□□ -1.07
GPNMB-214ENST00000492858 CORTO00230 105 aa8.37□□□□□ -1.07
GPNMB-214ENST00000492858 PSG9Q00887 426 aa8.37□□□□□ -1.07
GPNMB-214ENST00000492858 KLF9Q13886 244 aaPredicted RBP8.37□□□□□ -1.07
GPNMB-214ENST00000492858 FOXI2Q6ZQN5 318 aa8.37□□□□□ -1.07
GPNMB-214ENST00000492858 LHFPL1Q86WI0 220 aa8.37□□□□□ -1.07
GPNMB-214ENST00000492858 TMEM208Q9BTX3 173 aa8.37□□□□□ -1.07
GPNMB-214ENST00000492858 CCDC32Q9BV29 185 aa8.37□□□□□ -1.07
GPNMB-214ENST00000492858 MEIS3P1A6NDR6 274 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 IGKV1-39P01597 117 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 IGKV1D-39P04432 117 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 RNASE2P10153 161 aaKnown RBP8.36□□□□□ -1.07
GPNMB-214ENST00000492858 RFX2P48378 723 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 SUB1P53999 127 aaKnown RBP eCLIP8.36□□□□□ -1.07
GPNMB-214ENST00000492858 PHLDA2Q53GA4 152 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 Q6ZSN1 163 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 SLC35G3Q8N808 338 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 Q8WTZ3 238 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 MRGPRFQ96AM1 343 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 CLUHP3Q96NS8 147 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 UHRF2Q96PU4 802 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 ZNF2Q9BSG1 426 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-214ENST00000492858 WDR12Q9GZL7 423 aaKnown RBP8.36□□□□□ -1.07
GPNMB-214ENST00000492858 ZNF586Q9NXT0 402 aa8.36□□□□□ -1.07
GPNMB-214ENST00000492858 TRAV30A0A087WSZ9 112 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 A0A1W2PPQ1 181 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 M0QYG6 137 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 GPR31O00270 319 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 PRM2P04554 102 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 ATP5G1P05496 136 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 ATP5G3P48201 142 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 TAS2R46P59540 309 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 TAS2R19P59542 299 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 KRTAP10-1P60331 282 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 IFITM3Q01628 133 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 DHODHQ02127 395 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 ZNF846Q147U1 533 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 IZUMO4Q1ZYL8 232 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 COQ8AQ8NI60 647 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 FXYD6Q9H0Q3 95 aa8.35□□□□□ -1.07
GPNMB-214ENST00000492858 ZNF705GA8MUZ8 300 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-214ENST00000492858 INS-IGF2F8WCM5 200 aa8.34□□□□□ -1.07
GPNMB-214ENST00000492858 EREGO14944 169 aa8.34□□□□□ -1.07
GPNMB-214ENST00000492858 BUB3O43684 328 aa8.34□□□□□ -1.07
GPNMB-214ENST00000492858 CD3DP04234 171 aa8.34□□□□□ -1.07
GPNMB-214ENST00000492858 IL4P05112 153 aa8.34□□□□□ -1.07
GPNMB-214ENST00000492858 IGLC1P0CG04 106 aa8.34□□□□□ -1.07
GPNMB-214ENST00000492858 IL7P13232 177 aa8.34□□□□□ -1.07
GPNMB-214ENST00000492858 ID1P41134 155 aa8.34□□□□□ -1.07
GPNMB-214ENST00000492858 LINC00315P59091 139 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms