RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ODF1Q14990 250 aa9.98□□□□□ -0.81
UFD1-209ENST00000489406 TMEM17Q86X19 198 aa9.98□□□□□ -0.81
UFD1-209ENST00000489406 RNASE8Q8TDE3 154 aaKnown RBP9.98□□□□□ -0.81
UFD1-209ENST00000489406 METTL21EPA6NDL7 271 aa9.97□□□□□ -0.81
UFD1-209ENST00000489406 ZNF98A6NK75 572 aa9.97□□□□□ -0.81
UFD1-209ENST00000489406 K7EP13 123 aa9.97□□□□□ -0.81
UFD1-209ENST00000489406 ISLRO14498 428 aa9.97□□□□□ -0.81
UFD1-209ENST00000489406 IGLC1P0CG04 106 aa9.97□□□□□ -0.81
UFD1-209ENST00000489406 CNN1P51911 297 aaKnown RBP9.97□□□□□ -0.81
UFD1-209ENST00000489406 TBCEQ15813 527 aaPredicted RBP9.97□□□□□ -0.81
UFD1-209ENST00000489406 LYPD5Q6UWN5 251 aa9.97□□□□□ -0.81
UFD1-209ENST00000489406 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
UFD1-209ENST00000489406 WFDC10BQ8IUB3 73 aa9.97□□□□□ -0.81
UFD1-209ENST00000489406 MUC2Q02817 5179 aa9.96□□□□□ -0.81
UFD1-209ENST00000489406 RLN2P04090 185 aa9.96□□□□□ -0.82
UFD1-209ENST00000489406 RNASE2P10153 161 aaKnown RBP9.96□□□□□ -0.82
UFD1-209ENST00000489406 YPEL3P61236 119 aaPredicted RBP9.96□□□□□ -0.82
UFD1-209ENST00000489406 ARL6IP1Q15041 203 aa9.96□□□□□ -0.82
UFD1-209ENST00000489406 SFXN4Q6P4A7 337 aa9.96□□□□□ -0.82
UFD1-209ENST00000489406 OR1S2Q8NGQ3 325 aa9.96□□□□□ -0.82
UFD1-209ENST00000489406 OR6F1Q8NGZ6 308 aa9.96□□□□□ -0.82
UFD1-209ENST00000489406 TMEM263Q8WUH6 116 aaKnown RBP9.96□□□□□ -0.82
UFD1-209ENST00000489406 ATG5Q9H1Y0 275 aa9.96□□□□□ -0.82
UFD1-209ENST00000489406 DAPK2Q9UIK4 370 aa9.96□□□□□ -0.82
UFD1-209ENST00000489406 V9GY05 133 aa9.96□□□□□ -0.82
UFD1-209ENST00000489406 SSX5O60225 188 aa9.95□□□□□ -0.82
UFD1-209ENST00000489406 PGLYRP1O75594 196 aaPredicted RBP9.95□□□□□ -0.82
UFD1-209ENST00000489406 CRYGDP07320 174 aa9.95□□□□□ -0.82
UFD1-209ENST00000489406 RAB6AP20340 208 aa9.95□□□□□ -0.82
UFD1-209ENST00000489406 RANBP1P43487 201 aa9.95□□□□□ -0.82
UFD1-209ENST00000489406 TMEM256Q8N2U0 113 aa9.95□□□□□ -0.82
UFD1-209ENST00000489406 NANOGP1Q8N7R0 232 aa9.95□□□□□ -0.82
UFD1-209ENST00000489406 SLC25A39Q9BZJ4 359 aaPredicted RBP9.95□□□□□ -0.82
UFD1-209ENST00000489406 ICOSQ9Y6W8 199 aa9.95□□□□□ -0.82
UFD1-209ENST00000489406 TMEM235A6NFC5 223 aa9.94□□□□□ -0.82
UFD1-209ENST00000489406 OR10J1P30954 320 aa9.94□□□□□ -0.82
UFD1-209ENST00000489406 ETV6P41212 452 aa9.94□□□□□ -0.82
UFD1-209ENST00000489406 RND2P52198 227 aa9.94□□□□□ -0.82
UFD1-209ENST00000489406 SUB1P53999 127 aaKnown RBP eCLIP9.94□□□□□ -0.825e-8■□□□□ 8.7
UFD1-209ENST00000489406 GNG2P59768 71 aa9.94□□□□□ -0.82
UFD1-209ENST00000489406 H2BFWTQ7Z2G1 175 aa9.94□□□□□ -0.82
UFD1-209ENST00000489406 LRTM2Q8N967 370 aa9.94□□□□□ -0.82
UFD1-209ENST00000489406 OR51G1Q8NGK1 321 aa9.94□□□□□ -0.82
UFD1-209ENST00000489406 DUSP14O95147 198 aaKnown RBP9.93□□□□□ -0.82
UFD1-209ENST00000489406 FCER2P06734 321 aa9.93□□□□□ -0.82
UFD1-209ENST00000489406 RPL5P46777 297 aaKnown RBP9.93□□□□□ -0.82
UFD1-209ENST00000489406 ACOT6Q3I5F7 207 aaPredicted RBP9.93□□□□□ -0.82
UFD1-209ENST00000489406 TMEM91Q6ZNR0 172 aa9.93□□□□□ -0.82
UFD1-209ENST00000489406 C16orf92Q96LL3 132 aa9.93□□□□□ -0.82
UFD1-209ENST00000489406 LPAP08519 4548 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 A0A0B4J293 547 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 BOLA2-SMG1P6H3BVE0 249 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 RD3LP0DJH9 198 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 HSPA13P48723 471 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 RPS25P62851 125 aaKnown RBP9.92□□□□□ -0.82
UFD1-209ENST00000489406 WFDC2Q14508 124 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 C1orf146Q5VVC0 180 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 SLC35G3Q8N808 338 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 BEST4Q8NFU0 473 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 RBPMSQ93062 196 aaKnown RBP9.92□□□□□ -0.82
UFD1-209ENST00000489406 SEC22AQ96IW7 307 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 PBDC1Q9BVG4 233 aa9.92□□□□□ -0.82
UFD1-209ENST00000489406 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.91□□□□□ -0.82
UFD1-209ENST00000489406 ARL6IP5O75915 188 aa9.91□□□□□ -0.82
UFD1-209ENST00000489406 CALRP27797 417 aaKnown RBP9.91□□□□□ -0.82
UFD1-209ENST00000489406 OR10A3P58181 314 aa9.91□□□□□ -0.82
UFD1-209ENST00000489406 IZUMO4Q1ZYL8 232 aa9.91□□□□□ -0.82
UFD1-209ENST00000489406 PRSS54Q6PEW0 395 aa9.91□□□□□ -0.82
UFD1-209ENST00000489406 Q6ZRU5 148 aa9.91□□□□□ -0.82
UFD1-209ENST00000489406 C10orf126Q8N4M7 172 aa9.91□□□□□ -0.82
UFD1-209ENST00000489406 Q9HAA7 133 aa9.91□□□□□ -0.82
UFD1-209ENST00000489406 PAX4O43316 350 aa9.9□□□□□ -0.82
UFD1-209ENST00000489406 TOMM40O96008 361 aa9.9□□□□□ -0.82
UFD1-209ENST00000489406 PSG1P11464 419 aa9.9□□□□□ -0.82
UFD1-209ENST00000489406 ZNF182P17025 639 aaPredicted RBP9.9□□□□□ -0.82
UFD1-209ENST00000489406 NUP62P37198 522 aaPredicted RBP9.9□□□□□ -0.82
UFD1-209ENST00000489406 HERV-K104P61576 105 aa9.9□□□□□ -0.82
UFD1-209ENST00000489406 GNGT1P63211 74 aa9.9□□□□□ -0.82
UFD1-209ENST00000489406 Q6ZTI0 123 aa9.9□□□□□ -0.82
UFD1-209ENST00000489406 PYDC1Q8WXC3 89 aa9.9□□□□□ -0.82
UFD1-209ENST00000489406 BORCS5Q969J3 196 aa9.9□□□□□ -0.82
UFD1-209ENST00000489406 RCL1Q9Y2P8 373 aaKnown RBP9.9□□□□□ -0.82
UFD1-209ENST00000489406 TRAV5A0A0B4J249 113 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 SNURFLB1AK76 121 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 INS-IGF2F8WCM5 200 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 LCE2BO14633 110 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 GAMTQ14353 236 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 AHSA2Q719I0 299 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 CCDC28AQ8IWP9 274 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 ZNF555Q8NEP9 628 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 CCDC90BQ9GZT6 254 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 PFDN2Q9UHV9 154 aa9.89□□□□□ -0.83
UFD1-209ENST00000489406 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
UFD1-209ENST00000489406 ZNF324O75467 553 aaPredicted RBP9.88□□□□□ -0.83
UFD1-209ENST00000489406 IGKV1-39P01597 117 aa9.88□□□□□ -0.83
UFD1-209ENST00000489406 IGLV2-11P01706 119 aa9.88□□□□□ -0.83
UFD1-209ENST00000489406 IGKV1D-39P04432 117 aa9.88□□□□□ -0.83
UFD1-209ENST00000489406 RHOBP62745 196 aa9.88□□□□□ -0.83
UFD1-209ENST00000489406 ASAH1Q13510 395 aa9.88□□□□□ -0.83
UFD1-209ENST00000489406 IGFL4Q6B9Z1 124 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms